Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF223E7ERA6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF223E7ERA6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RNF223E7ERA6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF223E7ERA6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF223E7ERA6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.78■□□□□ 0.28
RNF223E7ERA6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF223E7ERA6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.78■□□□□ 0.28
RNF223E7ERA6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF223E7ERA6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF223E7ERA6 AC073195.1-201ENST00000607241 877 ntBASIC16.78■□□□□ 0.28
RNF223E7ERA6 AC092865.7-201ENST00000641832 219 ntBASIC16.78■□□□□ 0.28
RNF223E7ERA6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF223E7ERA6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF223E7ERA6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF223E7ERA6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RNF223E7ERA6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF223E7ERA6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RNF223E7ERA6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF223E7ERA6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RNF223E7ERA6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF223E7ERA6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF223E7ERA6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF223E7ERA6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
RNF223E7ERA6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.77■□□□□ 0.28
RNF223E7ERA6 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF223E7ERA6 AKR1B10P2-201ENST00000577332 927 ntBASIC16.77■□□□□ 0.28
RNF223E7ERA6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF223E7ERA6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
RNF223E7ERA6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
RNF223E7ERA6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF223E7ERA6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF223E7ERA6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.77■□□□□ 0.27
RNF223E7ERA6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF223E7ERA6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF223E7ERA6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.77■□□□□ 0.27
RNF223E7ERA6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF223E7ERA6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF223E7ERA6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF223E7ERA6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF223E7ERA6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF223E7ERA6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RNF223E7ERA6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF223E7ERA6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF223E7ERA6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNF223E7ERA6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF223E7ERA6 RBM17P1-201ENST00000453646 1190 ntBASIC16.76■□□□□ 0.27
RNF223E7ERA6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF223E7ERA6 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF223E7ERA6 AC145285.6-201ENST00000604632 637 ntBASIC16.76■□□□□ 0.27
RNF223E7ERA6 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC16.76■□□□□ 0.27
RNF223E7ERA6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF223E7ERA6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.76■□□□□ 0.27
RNF223E7ERA6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF223E7ERA6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF223E7ERA6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF223E7ERA6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF223E7ERA6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF223E7ERA6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF223E7ERA6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF223E7ERA6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF223E7ERA6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF223E7ERA6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
RNF223E7ERA6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF223E7ERA6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RNF223E7ERA6 UNC93B2-201ENST00000285383 730 ntBASIC16.75■□□□□ 0.27
RNF223E7ERA6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RNF223E7ERA6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF223E7ERA6 AC005521.1-201ENST00000393351 872 ntBASIC16.75■□□□□ 0.27
RNF223E7ERA6 MIR1238-201ENST00000408483 83 ntBASIC16.75■□□□□ 0.27
RNF223E7ERA6 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF223E7ERA6 AP002982.1-201ENST00000492365 877 ntBASIC16.75■□□□□ 0.27
RNF223E7ERA6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF223E7ERA6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF223E7ERA6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF223E7ERA6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF223E7ERA6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF223E7ERA6 AP000525.1-201ENST00000608286 694 ntBASIC16.75■□□□□ 0.27
RNF223E7ERA6 AC004264.1-201ENST00000608354 794 ntBASIC16.75■□□□□ 0.27
RNF223E7ERA6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF223E7ERA6 KRT8P9-201ENST00000558927 1449 ntBASIC16.75■□□□□ 0.27
RNF223E7ERA6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF223E7ERA6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF223E7ERA6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF223E7ERA6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF223E7ERA6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF223E7ERA6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF223E7ERA6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.75■□□□□ 0.27
RNF223E7ERA6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF223E7ERA6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF223E7ERA6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF223E7ERA6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RNF223E7ERA6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF223E7ERA6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF223E7ERA6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF223E7ERA6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF223E7ERA6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF223E7ERA6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF223E7ERA6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF223E7ERA6 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms