Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.12■□□□□ 0.17
CGB1A6NKQ9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 AC026271.2-201ENST00000428091 497 ntBASIC16.11■□□□□ 0.17
CGB1A6NKQ9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CGB1A6NKQ9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 AC016405.3-201ENST00000607710 860 ntBASIC16.1■□□□□ 0.17
CGB1A6NKQ9 FAM21FP-204ENST00000608637 956 ntBASIC16.1■□□□□ 0.17
CGB1A6NKQ9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB1A6NKQ9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 DPP3P2-201ENST00000416030 1696 ntBASIC16.09■□□□□ 0.17
CGB1A6NKQ9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 MFSD11-216ENST00000590393 1141 ntBASIC16.09■□□□□ 0.17
CGB1A6NKQ9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 AL591742.1-201ENST00000604433 565 ntBASIC16.09■□□□□ 0.17
CGB1A6NKQ9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.09■□□□□ 0.17
CGB1A6NKQ9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CGB1A6NKQ9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.08■□□□□ 0.17
CGB1A6NKQ9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CGB1A6NKQ9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.08■□□□□ 0.16
CGB1A6NKQ9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms