Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PLEKHD1A6NEE1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PLEKHD1A6NEE1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PLEKHD1A6NEE1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
PLEKHD1A6NEE1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
PLEKHD1A6NEE1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PLEKHD1A6NEE1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
PLEKHD1A6NEE1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC31.28■■■□□ 2.6
PLEKHD1A6NEE1 CR392000.1-201ENST00000624770 1228 ntBASIC31.28■■■□□ 2.6
PLEKHD1A6NEE1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC31.28■■■□□ 2.6
PLEKHD1A6NEE1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
PLEKHD1A6NEE1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 NIFKP9-201ENST00000419265 221 ntBASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PLEKHD1A6NEE1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
PLEKHD1A6NEE1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC31.26■■■□□ 2.6
PLEKHD1A6NEE1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PLEKHD1A6NEE1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC31.26■■■□□ 2.59
PLEKHD1A6NEE1 AL137013.1-201ENST00000432946 1228 ntBASIC31.26■■■□□ 2.59
PLEKHD1A6NEE1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC31.26■■■□□ 2.59
PLEKHD1A6NEE1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC31.26■■■□□ 2.59
PLEKHD1A6NEE1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC31.26■■■□□ 2.59
PLEKHD1A6NEE1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC31.26■■■□□ 2.59
PLEKHD1A6NEE1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
PLEKHD1A6NEE1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PLEKHD1A6NEE1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC31.25■■■□□ 2.59
PLEKHD1A6NEE1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC31.25■■■□□ 2.59
PLEKHD1A6NEE1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC31.25■■■□□ 2.59
PLEKHD1A6NEE1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PLEKHD1A6NEE1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC31.25■■■□□ 2.59
PLEKHD1A6NEE1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PLEKHD1A6NEE1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC31.25■■■□□ 2.59
PLEKHD1A6NEE1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC31.25■■■□□ 2.59
PLEKHD1A6NEE1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC31.25■■■□□ 2.59
PLEKHD1A6NEE1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC31.25■■■□□ 2.59
PLEKHD1A6NEE1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
PLEKHD1A6NEE1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PLEKHD1A6NEE1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 SLC25A3P1-201ENST00000443844 931 ntBASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC31.23■■■□□ 2.59
PLEKHD1A6NEE1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 GUSBP5-202ENST00000510805 1989 ntBASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 KRT16P1-201ENST00000399124 1418 ntBASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC31.22■■■□□ 2.59
PLEKHD1A6NEE1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PLEKHD1A6NEE1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
PLEKHD1A6NEE1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PLEKHD1A6NEE1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC31.21■■■□□ 2.59
PLEKHD1A6NEE1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC31.21■■■□□ 2.59
PLEKHD1A6NEE1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC31.21■■■□□ 2.59
PLEKHD1A6NEE1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC31.21■■■□□ 2.59
PLEKHD1A6NEE1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PLEKHD1A6NEE1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PLEKHD1A6NEE1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms