Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.58■□□□□ 0.41
SHISA3A0PJX4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHISA3A0PJX4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
SHISA3A0PJX4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SHISA3A0PJX4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SHISA3A0PJX4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SHISA3A0PJX4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SHISA3A0PJX4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHISA3A0PJX4 LETM1P2-201ENST00000597330 2178 ntBASIC17.58■□□□□ 0.4
SHISA3A0PJX4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 AC007613.1-201ENST00000572811 2597 ntBASIC17.58■□□□□ 0.4
SHISA3A0PJX4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 AC116050.2-201ENST00000612102 1779 ntBASIC17.58■□□□□ 0.4
SHISA3A0PJX4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.58■□□□□ 0.4
SHISA3A0PJX4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 KRT8P36-201ENST00000489121 1440 ntBASIC17.57■□□□□ 0.4
SHISA3A0PJX4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 AC131281.2-201ENST00000520478 145 ntBASIC17.57■□□□□ 0.4
SHISA3A0PJX4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHISA3A0PJX4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 POU5F1P4-201ENST00000413175 1085 ntBASIC17.56■□□□□ 0.4
SHISA3A0PJX4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHISA3A0PJX4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHISA3A0PJX4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHISA3A0PJX4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHISA3A0PJX4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SHISA3A0PJX4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHISA3A0PJX4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SHISA3A0PJX4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.55■□□□□ 0.4
SHISA3A0PJX4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.55■□□□□ 0.4
SHISA3A0PJX4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms