Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV13-2A0A0B4J235 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 MIR4449-201ENST00000578365 66 ntBASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV13-2A0A0B4J235 TMEM179-206ENST00000616017 1645 ntBASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-2A0A0B4J235 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 PVT1_1.1-201ENST00000615125 194 ntBASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 AC093503.3-201ENST00000624917 2352 ntBASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV13-2A0A0B4J235 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms