Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.96■■□□□ 1.27
PTCH2Q9Y6C5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
PTCH2Q9Y6C5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCH2Q9Y6C5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCH2Q9Y6C5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.95■■□□□ 1.26
PTCH2Q9Y6C5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCH2Q9Y6C5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.95■■□□□ 1.26
PTCH2Q9Y6C5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.95■■□□□ 1.26
PTCH2Q9Y6C5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.95■■□□□ 1.26
PTCH2Q9Y6C5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
PTCH2Q9Y6C5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 AL121906.2-201ENST00000621597 723 ntBASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCH2Q9Y6C5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 C9orf163-202ENST00000624034 2573 ntBASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 CRYGFP-201ENST00000418459 633 ntBASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 KSR1P1-201ENST00000446298 240 ntBASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 AC022616.7-201ENST00000525383 220 ntBASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 AC027702.1-201ENST00000563810 1770 ntBASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PTCH2Q9Y6C5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 AK4P3-201ENST00000418260 669 ntBASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCH2Q9Y6C5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 KRT16P1-201ENST00000399124 1418 ntBASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 NIFKP9-201ENST00000419265 221 ntBASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 ECEL1P2-202ENST00000465689 757 ntBASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms