Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 DUX4L1-201ENST00000627662 1275 ntBASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 DUX4L8-201ENST00000629013 1275 ntBASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 DUX4L3-201ENST00000630187 1275 ntBASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 DUX4L7-201ENST00000630678 1275 ntBASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 DUX4L5-201ENST00000630834 1275 ntBASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.35■□□□□ 0.69
AP4B1Q9Y6B7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 TCF3P1-201ENST00000423021 1937 ntBASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4B1Q9Y6B7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.33■□□□□ 0.69
AP4B1Q9Y6B7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.33■□□□□ 0.69
AP4B1Q9Y6B7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP4B1Q9Y6B7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.33■□□□□ 0.69
AP4B1Q9Y6B7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP4B1Q9Y6B7 LETM1P2-201ENST00000597330 2178 ntBASIC19.33■□□□□ 0.69
AP4B1Q9Y6B7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
AP4B1Q9Y6B7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP4B1Q9Y6B7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
AP4B1Q9Y6B7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP4B1Q9Y6B7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.33■□□□□ 0.68
AP4B1Q9Y6B7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP4B1Q9Y6B7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.33■□□□□ 0.68
AP4B1Q9Y6B7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.33■□□□□ 0.68
AP4B1Q9Y6B7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.33■□□□□ 0.68
AP4B1Q9Y6B7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP4B1Q9Y6B7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP4B1Q9Y6B7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.33■□□□□ 0.68
AP4B1Q9Y6B7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
AP4B1Q9Y6B7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP4B1Q9Y6B7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP4B1Q9Y6B7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4B1Q9Y6B7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 AL158211.5-201ENST00000623583 2518 ntBASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
AP4B1Q9Y6B7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms