Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 AC105020.6-201ENST00000621523 1217 ntBASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
PCDHB9Q9Y5E1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB9Q9Y5E1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB9Q9Y5E1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHB9Q9Y5E1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHB9Q9Y5E1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB9Q9Y5E1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHB9Q9Y5E1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHB9Q9Y5E1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHB9Q9Y5E1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHB9Q9Y5E1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHB9Q9Y5E1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB9Q9Y5E1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB9Q9Y5E1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.52■□□□□ 0.87
PCDHB9Q9Y5E1 KRT8P36-201ENST00000489121 1440 ntBASIC20.52■□□□□ 0.87
PCDHB9Q9Y5E1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHB9Q9Y5E1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PCDHB9Q9Y5E1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB9Q9Y5E1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms