Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM2Q9Y333 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM2Q9Y333 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.95■□□□□ 0.46
LSM2Q9Y333 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM2Q9Y333 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM2Q9Y333 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM2Q9Y333 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
LSM2Q9Y333 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM2Q9Y333 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.95■□□□□ 0.46
LSM2Q9Y333 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.95■□□□□ 0.46
LSM2Q9Y333 AC105233.4-201ENST00000642045 216 ntBASIC17.95■□□□□ 0.46
LSM2Q9Y333 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM2Q9Y333 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.95■□□□□ 0.46
LSM2Q9Y333 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.95■□□□□ 0.46
LSM2Q9Y333 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.95■□□□□ 0.46
LSM2Q9Y333 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM2Q9Y333 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM2Q9Y333 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM2Q9Y333 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM2Q9Y333 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM2Q9Y333 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.95■□□□□ 0.46
LSM2Q9Y333 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM2Q9Y333 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM2Q9Y333 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSM2Q9Y333 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM2Q9Y333 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSM2Q9Y333 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM2Q9Y333 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM2Q9Y333 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSM2Q9Y333 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 POU5F1P4-201ENST00000413175 1085 ntBASIC17.94■□□□□ 0.46
LSM2Q9Y333 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSM2Q9Y333 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 AC233992.3-201ENST00000607491 485 ntBASIC17.94■□□□□ 0.46
LSM2Q9Y333 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM2Q9Y333 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM2Q9Y333 KRT8P36-201ENST00000489121 1440 ntBASIC17.94■□□□□ 0.46
LSM2Q9Y333 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.94■□□□□ 0.46
LSM2Q9Y333 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LSM2Q9Y333 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM2Q9Y333 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSM2Q9Y333 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM2Q9Y333 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM2Q9Y333 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM2Q9Y333 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM2Q9Y333 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM2Q9Y333 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM2Q9Y333 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM2Q9Y333 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 AC116050.2-201ENST00000612102 1779 ntBASIC17.93■□□□□ 0.46
LSM2Q9Y333 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM2Q9Y333 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM2Q9Y333 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.93■□□□□ 0.46
LSM2Q9Y333 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM2Q9Y333 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM2Q9Y333 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LSM2Q9Y333 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LSM2Q9Y333 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.92■□□□□ 0.46
LSM2Q9Y333 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
LSM2Q9Y333 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM2Q9Y333 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
LSM2Q9Y333 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM2Q9Y333 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM2Q9Y333 AC245052.3-201ENST00000450182 901 ntBASIC17.92■□□□□ 0.46
LSM2Q9Y333 MIR4767-201ENST00000582827 78 ntBASIC17.92■□□□□ 0.46
LSM2Q9Y333 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.92■□□□□ 0.46
LSM2Q9Y333 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM2Q9Y333 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM2Q9Y333 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LSM2Q9Y333 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.92■□□□□ 0.46
LSM2Q9Y333 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM2Q9Y333 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM2Q9Y333 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSM2Q9Y333 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms