Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TSR3Q9UJK0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TSR3Q9UJK0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.05■□□□□ 0.8
TSR3Q9UJK0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR3Q9UJK0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSR3Q9UJK0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSR3Q9UJK0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TSR3Q9UJK0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSR3Q9UJK0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.05■□□□□ 0.8
TSR3Q9UJK0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR3Q9UJK0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 CDCA4P2-201ENST00000441182 718 ntBASIC20.04■□□□□ 0.8
TSR3Q9UJK0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 AC231657.2-201ENST00000624556 255 ntBASIC20.04■□□□□ 0.8
TSR3Q9UJK0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR3Q9UJK0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 AC092720.2-201ENST00000602388 1665 ntBASIC20.03■□□□□ 0.8
TSR3Q9UJK0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 AL355472.2-201ENST00000422958 438 ntBASIC20.03■□□□□ 0.8
TSR3Q9UJK0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 AL512408.1-201ENST00000569378 2000 ntBASIC20.03■□□□□ 0.8
TSR3Q9UJK0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.03■□□□□ 0.8
TSR3Q9UJK0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 SMG8-203ENST00000578922 2178 ntBASIC20.02■□□□□ 0.8
TSR3Q9UJK0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 AC093787.1-201ENST00000450396 207 ntBASIC20.02■□□□□ 0.8
TSR3Q9UJK0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 FAM21FP-204ENST00000608637 956 ntBASIC20.02■□□□□ 0.8
TSR3Q9UJK0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 AC008694.1-202ENST00000636953 945 ntBASIC20.02■□□□□ 0.8
TSR3Q9UJK0 CYP21A1P-202ENST00000354927 1481 ntBASIC20.02■□□□□ 0.8
TSR3Q9UJK0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 GABARAPL3-202ENST00000624044 1851 ntBASIC20.02■□□□□ 0.8
TSR3Q9UJK0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TSR3Q9UJK0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TSR3Q9UJK0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.02■□□□□ 0.79
TSR3Q9UJK0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TSR3Q9UJK0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TSR3Q9UJK0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.01■□□□□ 0.79
TSR3Q9UJK0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TSR3Q9UJK0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
TSR3Q9UJK0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSR3Q9UJK0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TSR3Q9UJK0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms