Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 AC123595.1-201ENST00000440769 1046 ntBASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 TCF3P1-201ENST00000423021 1937 ntBASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRCC1Q9NPI7 AC112907.3-201ENST00000577781 2400 ntBASIC18.52■□□□□ 0.55
KRCC1Q9NPI7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.52■□□□□ 0.55
KRCC1Q9NPI7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRCC1Q9NPI7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRCC1Q9NPI7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRCC1Q9NPI7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 SLC7A5P2-201ENST00000553010 536 ntBASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 BCL2-203ENST00000589955 5011 ntBASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 AFG3L1P-217ENST00000557444 2447 ntBASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRCC1Q9NPI7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 CDV3P1-201ENST00000471403 739 ntBASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 TERF1P2-201ENST00000583350 1212 ntBASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.5■□□□□ 0.55
KRCC1Q9NPI7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 PGM5P4-201ENST00000421970 445 ntBASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 SLC7A5P1-201ENST00000568957 537 ntBASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 AC005837.3-201ENST00000612163 286 ntBASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRCC1Q9NPI7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 AC097381.1-201ENST00000429019 1296 ntBASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRCC1Q9NPI7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms