Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 LIN28AP1-201ENST00000429574 405 ntBASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZFYVE28Q9HCC9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.22■■□□□ 1.31
ZFYVE28Q9HCC9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
ZFYVE28Q9HCC9 NIFKP9-201ENST00000419265 221 ntBASIC23.22■■□□□ 1.31
ZFYVE28Q9HCC9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.22■■□□□ 1.31
ZFYVE28Q9HCC9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
ZFYVE28Q9HCC9 WWOX-216ENST00000569818 525 ntBASIC23.22■■□□□ 1.31
ZFYVE28Q9HCC9 KRT16P1-201ENST00000399124 1418 ntBASIC23.22■■□□□ 1.31
ZFYVE28Q9HCC9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZFYVE28Q9HCC9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 ATP5G1P1-201ENST00000448724 379 ntBASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZFYVE28Q9HCC9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 AC010203.1-204ENST00000548782 407 ntBASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZFYVE28Q9HCC9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZFYVE28Q9HCC9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZFYVE28Q9HCC9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZFYVE28Q9HCC9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC23.19■■□□□ 1.3
ZFYVE28Q9HCC9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZFYVE28Q9HCC9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ZFYVE28Q9HCC9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.19■■□□□ 1.3
ZFYVE28Q9HCC9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZFYVE28Q9HCC9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC23.19■■□□□ 1.3
ZFYVE28Q9HCC9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.19■■□□□ 1.3
ZFYVE28Q9HCC9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
ZFYVE28Q9HCC9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZFYVE28Q9HCC9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZFYVE28Q9HCC9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZFYVE28Q9HCC9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms