Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 AC022517.1-201ENST00000592429 346 ntBASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 DPP3P2-201ENST00000416030 1696 ntBASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 MCRIP2P1-201ENST00000394346 511 ntBASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 AC007322.1-201ENST00000426983 750 ntBASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 CYP2T1P-201ENST00000432607 1285 ntBASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC40Q9H9A6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.52■□□□□ 0.87
LRRC40Q9H9A6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC40Q9H9A6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.52■□□□□ 0.87
LRRC40Q9H9A6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 AC069236.1-201ENST00000604339 616 ntBASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 PCDHAC2-203ENST00000615316 3011 ntBASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 AC112907.3-201ENST00000577781 2400 ntBASIC20.51■□□□□ 0.87
LRRC40Q9H9A6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC40Q9H9A6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 AC008694.1-202ENST00000636953 945 ntBASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LRRC40Q9H9A6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.48■□□□□ 0.87
LRRC40Q9H9A6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms