Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 AL391422.3-201ENST00000603791 2761 ntBASIC18.71■□□□□ 0.59
UBQLN3Q9H347 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN3Q9H347 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
UBQLN3Q9H347 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 CYP2T3P-201ENST00000601990 817 ntBASIC18.7■□□□□ 0.58
UBQLN3Q9H347 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 FP700111.2-201ENST00000619190 1892 ntBASIC18.7■□□□□ 0.58
UBQLN3Q9H347 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
UBQLN3Q9H347 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 MCRIP2P1-201ENST00000394346 511 ntBASIC18.69■□□□□ 0.58
UBQLN3Q9H347 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 AC011484.1-201ENST00000377652 1995 ntBASIC18.69■□□□□ 0.58
UBQLN3Q9H347 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
UBQLN3Q9H347 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 MYC-209ENST00000641252 345 ntBASIC18.68■□□□□ 0.58
UBQLN3Q9H347 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN3Q9H347 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms