Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCC1Q96S66 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CLCC1Q96S66 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCC1Q96S66 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 AC005224.4-201ENST00000583262 1652 ntBASIC16.94■□□□□ 0.3
CLCC1Q96S66 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CLCC1Q96S66 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CLCC1Q96S66 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLCC1Q96S66 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLCC1Q96S66 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.94■□□□□ 0.3
CLCC1Q96S66 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.94■□□□□ 0.3
CLCC1Q96S66 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.94■□□□□ 0.3
CLCC1Q96S66 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CLCC1Q96S66 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 NFIC-211ENST00000641145 8399 ntBASIC16.94■□□□□ 0.3
CLCC1Q96S66 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.94■□□□□ 0.3
CLCC1Q96S66 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCC1Q96S66 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.93■□□□□ 0.3
CLCC1Q96S66 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CLCC1Q96S66 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.93■□□□□ 0.3
CLCC1Q96S66 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.93■□□□□ 0.3
CLCC1Q96S66 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.93■□□□□ 0.3
CLCC1Q96S66 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.93■□□□□ 0.3
CLCC1Q96S66 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
CLCC1Q96S66 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.93■□□□□ 0.3
CLCC1Q96S66 AL358852.1-201ENST00000623174 1268 ntBASIC16.93■□□□□ 0.3
CLCC1Q96S66 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLCC1Q96S66 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.93■□□□□ 0.3
CLCC1Q96S66 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CLCC1Q96S66 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLCC1Q96S66 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCC1Q96S66 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLCC1Q96S66 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCC1Q96S66 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLCC1Q96S66 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCC1Q96S66 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCC1Q96S66 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCC1Q96S66 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCC1Q96S66 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CLCC1Q96S66 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCC1Q96S66 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.92■□□□□ 0.3
CLCC1Q96S66 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLCC1Q96S66 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLCC1Q96S66 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLCC1Q96S66 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.92■□□□□ 0.3
CLCC1Q96S66 AC018445.3-201ENST00000624177 1945 ntBASIC16.92■□□□□ 0.3
CLCC1Q96S66 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLCC1Q96S66 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCC1Q96S66 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.91■□□□□ 0.3
CLCC1Q96S66 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
CLCC1Q96S66 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
CLCC1Q96S66 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCC1Q96S66 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLCC1Q96S66 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCC1Q96S66 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLCC1Q96S66 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CLCC1Q96S66 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
CLCC1Q96S66 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCC1Q96S66 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLCC1Q96S66 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CLCC1Q96S66 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.91■□□□□ 0.3
CLCC1Q96S66 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLCC1Q96S66 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.91■□□□□ 0.3
CLCC1Q96S66 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCC1Q96S66 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.91■□□□□ 0.3
CLCC1Q96S66 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCC1Q96S66 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCC1Q96S66 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCC1Q96S66 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLCC1Q96S66 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms