Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC47A1Q96FL8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC47A1Q96FL8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC47A1Q96FL8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC47A1Q96FL8 KRT87P-202ENST00000534226 1464 ntBASIC19.02■□□□□ 0.63
SLC47A1Q96FL8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SLC47A1Q96FL8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLC47A1Q96FL8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC47A1Q96FL8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SLC47A1Q96FL8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC47A1Q96FL8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 AC008175.2-201ENST00000612840 297 ntBASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 AC098818.2-201ENST00000564925 2320 ntBASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC47A1Q96FL8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19■□□□□ 0.63
SLC47A1Q96FL8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19■□□□□ 0.63
SLC47A1Q96FL8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19■□□□□ 0.63
SLC47A1Q96FL8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SLC47A1Q96FL8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SLC47A1Q96FL8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19■□□□□ 0.63
SLC47A1Q96FL8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 LINC02228-203ENST00000641970 1355 ntBASIC19■□□□□ 0.63
SLC47A1Q96FL8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19■□□□□ 0.63
SLC47A1Q96FL8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC47A1Q96FL8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19■□□□□ 0.63
SLC47A1Q96FL8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
SLC47A1Q96FL8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19■□□□□ 0.63
SLC47A1Q96FL8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19■□□□□ 0.63
SLC47A1Q96FL8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 POU5F1P4-201ENST00000413175 1085 ntBASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC47A1Q96FL8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 MIR2861-201ENST00000636310 90 ntBASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.98■□□□□ 0.63
SLC47A1Q96FL8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC47A1Q96FL8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC47A1Q96FL8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC47A1Q96FL8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC47A1Q96FL8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC47A1Q96FL8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC47A1Q96FL8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC47A1Q96FL8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC47A1Q96FL8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC47A1Q96FL8 AC123595.1-201ENST00000440769 1046 ntBASIC18.97■□□□□ 0.63
SLC47A1Q96FL8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.97■□□□□ 0.63
SLC47A1Q96FL8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms