Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM11Q96F44 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM11Q96F44 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM11Q96F44 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM11Q96F44 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM11Q96F44 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM11Q96F44 RARRES2P4-201ENST00000514074 484 ntBASIC21.37■■□□□ 1.01
TRIM11Q96F44 DUX4L16-201ENST00000555130 1264 ntBASIC21.37■■□□□ 1.01
TRIM11Q96F44 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.37■■□□□ 1.01
TRIM11Q96F44 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM11Q96F44 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM11Q96F44 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TRIM11Q96F44 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM11Q96F44 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRIM11Q96F44 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM11Q96F44 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 MCRIP2P1-201ENST00000394346 511 ntBASIC21.36■■□□□ 1.01
TRIM11Q96F44 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM11Q96F44 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.36■■□□□ 1.01
TRIM11Q96F44 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
TRIM11Q96F44 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TRIM11Q96F44 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.36■■□□□ 1.01
TRIM11Q96F44 MIR5787-201ENST00000611784 55 ntBASIC21.36■■□□□ 1.01
TRIM11Q96F44 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM11Q96F44 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRIM11Q96F44 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM11Q96F44 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TRIM11Q96F44 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM11Q96F44 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM11Q96F44 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM11Q96F44 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM11Q96F44 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM11Q96F44 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM11Q96F44 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM11Q96F44 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM11Q96F44 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.35■■□□□ 1.01
TRIM11Q96F44 CNN2P6-201ENST00000439038 900 ntBASIC21.35■■□□□ 1.01
TRIM11Q96F44 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM11Q96F44 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.35■■□□□ 1.01
TRIM11Q96F44 AC011767.1-201ENST00000617410 1153 ntBASIC21.35■■□□□ 1.01
TRIM11Q96F44 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM11Q96F44 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM11Q96F44 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TRIM11Q96F44 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM11Q96F44 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM11Q96F44 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM11Q96F44 AC112907.3-201ENST00000577781 2400 ntBASIC21.35■■□□□ 1.01
TRIM11Q96F44 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.35■■□□□ 1.01
TRIM11Q96F44 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM11Q96F44 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM11Q96F44 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM11Q96F44 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 BID-214ENST00000617586 542 ntTSL 5 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM11Q96F44 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM11Q96F44 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM11Q96F44 AC068338.2-201ENST00000563278 1430 ntBASIC21.34■■□□□ 1.01
TRIM11Q96F44 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM11Q96F44 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM11Q96F44 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TRIM11Q96F44 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.33■■□□□ 1.01
TRIM11Q96F44 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM11Q96F44 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM11Q96F44 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TRIM11Q96F44 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM11Q96F44 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TRIM11Q96F44 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.33■■□□□ 1.01
TRIM11Q96F44 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM11Q96F44 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM11Q96F44 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM11Q96F44 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.33■■□□□ 1.01
TRIM11Q96F44 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM11Q96F44 AC069236.1-201ENST00000604339 616 ntBASIC21.33■■□□□ 1.01
TRIM11Q96F44 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.33■■□□□ 1.01
TRIM11Q96F44 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM11Q96F44 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM11Q96F44 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.33■■□□□ 1
TRIM11Q96F44 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms