Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APH1AQ96BI3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APH1AQ96BI3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
APH1AQ96BI3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APH1AQ96BI3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APH1AQ96BI3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APH1AQ96BI3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
APH1AQ96BI3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
APH1AQ96BI3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
APH1AQ96BI3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
APH1AQ96BI3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
APH1AQ96BI3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
APH1AQ96BI3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
APH1AQ96BI3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APH1AQ96BI3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
APH1AQ96BI3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
APH1AQ96BI3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APH1AQ96BI3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.89■□□□□ 0.45
APH1AQ96BI3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APH1AQ96BI3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.89■□□□□ 0.45
APH1AQ96BI3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.89■□□□□ 0.45
APH1AQ96BI3 HLA-B-256ENST00000639848 1089 ntBASIC17.89■□□□□ 0.45
APH1AQ96BI3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APH1AQ96BI3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APH1AQ96BI3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
APH1AQ96BI3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APH1AQ96BI3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
APH1AQ96BI3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.88■□□□□ 0.45
APH1AQ96BI3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APH1AQ96BI3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.88■□□□□ 0.45
APH1AQ96BI3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APH1AQ96BI3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
APH1AQ96BI3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APH1AQ96BI3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.88■□□□□ 0.45
APH1AQ96BI3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.88■□□□□ 0.45
APH1AQ96BI3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APH1AQ96BI3 AC060766.5-201ENST00000590539 871 ntBASIC17.88■□□□□ 0.45
APH1AQ96BI3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.88■□□□□ 0.45
APH1AQ96BI3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.88■□□□□ 0.45
APH1AQ96BI3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
APH1AQ96BI3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APH1AQ96BI3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APH1AQ96BI3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.88■□□□□ 0.45
APH1AQ96BI3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APH1AQ96BI3 AC092368.3-202ENST00000574180 1591 ntBASIC17.87■□□□□ 0.45
APH1AQ96BI3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
APH1AQ96BI3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
APH1AQ96BI3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
APH1AQ96BI3 AC092720.2-201ENST00000602388 1665 ntBASIC17.87■□□□□ 0.45
APH1AQ96BI3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.87■□□□□ 0.45
APH1AQ96BI3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
APH1AQ96BI3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
APH1AQ96BI3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.87■□□□□ 0.45
APH1AQ96BI3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
APH1AQ96BI3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
APH1AQ96BI3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.87■□□□□ 0.45
APH1AQ96BI3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.87■□□□□ 0.45
APH1AQ96BI3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
APH1AQ96BI3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.87■□□□□ 0.45
APH1AQ96BI3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.87■□□□□ 0.45
APH1AQ96BI3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
APH1AQ96BI3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
APH1AQ96BI3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.87■□□□□ 0.45
APH1AQ96BI3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APH1AQ96BI3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
APH1AQ96BI3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APH1AQ96BI3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
APH1AQ96BI3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
APH1AQ96BI3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.86■□□□□ 0.45
APH1AQ96BI3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
APH1AQ96BI3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APH1AQ96BI3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APH1AQ96BI3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.86■□□□□ 0.45
APH1AQ96BI3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.86■□□□□ 0.45
APH1AQ96BI3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.86■□□□□ 0.45
APH1AQ96BI3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.86■□□□□ 0.45
APH1AQ96BI3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APH1AQ96BI3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APH1AQ96BI3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.86■□□□□ 0.45
APH1AQ96BI3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.86■□□□□ 0.45
APH1AQ96BI3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
APH1AQ96BI3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
APH1AQ96BI3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.86■□□□□ 0.45
APH1AQ96BI3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APH1AQ96BI3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms