Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.39■□□□□ 0.69
VPS33AQ96AX1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS33AQ96AX1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
VPS33AQ96AX1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
VPS33AQ96AX1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS33AQ96AX1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS33AQ96AX1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS33AQ96AX1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VPS33AQ96AX1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VPS33AQ96AX1 AC010141.2-201ENST00000452426 721 ntBASIC19.38■□□□□ 0.69
VPS33AQ96AX1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.38■□□□□ 0.69
VPS33AQ96AX1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
VPS33AQ96AX1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VPS33AQ96AX1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.38■□□□□ 0.69
VPS33AQ96AX1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 IRS3P-201ENST00000223076 1006 ntBASIC19.37■□□□□ 0.69
VPS33AQ96AX1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS33AQ96AX1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS33AQ96AX1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VPS33AQ96AX1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 AL139246.5-201ENST00000606645 996 ntBASIC19.34■□□□□ 0.69
VPS33AQ96AX1 AC104187.1-201ENST00000607510 612 ntBASIC19.34■□□□□ 0.69
VPS33AQ96AX1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS33AQ96AX1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS33AQ96AX1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS33AQ96AX1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms