Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 AL138724.1-201ENST00000606771 1088 ntBASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM4Q8WVI0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 SRD5A1P1-201ENST00000442297 786 ntBASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM4Q8WVI0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.27■□□□□ 0.35
SMIM4Q8WVI0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM4Q8WVI0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.27■□□□□ 0.35
SMIM4Q8WVI0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.27■□□□□ 0.35
SMIM4Q8WVI0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 AC136469.2-201ENST00000623944 1028 ntBASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.26■□□□□ 0.35
SMIM4Q8WVI0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 BX119927.1-201ENST00000636596 1552 ntBASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 AL138781.2-201ENST00000617896 1843 ntBASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM4Q8WVI0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 UNC93B8-201ENST00000511903 705 ntBASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms