Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.31■□□□□ 0.84
BCAS4Q8TDM0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS4Q8TDM0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS4Q8TDM0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS4Q8TDM0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.31■□□□□ 0.84
BCAS4Q8TDM0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
BCAS4Q8TDM0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.31■□□□□ 0.84
BCAS4Q8TDM0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.31■□□□□ 0.84
BCAS4Q8TDM0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.31■□□□□ 0.84
BCAS4Q8TDM0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
BCAS4Q8TDM0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS4Q8TDM0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 BX005040.4-201ENST00000637145 1518 ntBASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCAS4Q8TDM0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 AC020916.1-201ENST00000587762 1774 ntBASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.29■□□□□ 0.84
BCAS4Q8TDM0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 PVT1_1.1-201ENST00000615125 194 ntBASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCAS4Q8TDM0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 AL691432.2-201ENST00000607222 2038 ntBASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 AC079598.2-202ENST00000546624 1451 ntBASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 U85056.1-201ENST00000616429 682 ntBASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCAS4Q8TDM0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BCAS4Q8TDM0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.26■□□□□ 0.83
BCAS4Q8TDM0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCAS4Q8TDM0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCAS4Q8TDM0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
BCAS4Q8TDM0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
BCAS4Q8TDM0 AL133373.2-201ENST00000623187 2828 ntBASIC20.26■□□□□ 0.83
BCAS4Q8TDM0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms