Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 AL020996.1-203ENST00000536896 2307 ntBASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 POU5F1P4-201ENST00000413175 1085 ntBASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 MIR4767-201ENST00000582827 78 ntBASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB3IL1Q8TBN0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.08■□□□□ 0.81
RAB3IL1Q8TBN0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RAB3IL1Q8TBN0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB3IL1Q8TBN0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RAB3IL1Q8TBN0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB3IL1Q8TBN0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.07■□□□□ 0.8
RAB3IL1Q8TBN0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 TMEM179-206ENST00000616017 1645 ntBASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 AC008175.2-201ENST00000612840 297 ntBASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 RARRES2P11-201ENST00000635158 484 ntBASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB3IL1Q8TBN0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms