Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC16Q8NEE8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC16Q8NEE8 KRT17P3-201ENST00000420566 1262 ntBASIC21.21■□□□□ 0.99
TTC16Q8NEE8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.21■□□□□ 0.99
TTC16Q8NEE8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.21■□□□□ 0.99
TTC16Q8NEE8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC16Q8NEE8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.21■□□□□ 0.99
TTC16Q8NEE8 C2orf69P4-201ENST00000565394 541 ntBASIC21.21■□□□□ 0.99
TTC16Q8NEE8 AC233263.1-201ENST00000578059 224 ntBASIC21.21■□□□□ 0.99
TTC16Q8NEE8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.21■□□□□ 0.99
TTC16Q8NEE8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TTC16Q8NEE8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC21.21■□□□□ 0.99
TTC16Q8NEE8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC16Q8NEE8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC16Q8NEE8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
TTC16Q8NEE8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.2■□□□□ 0.98
TTC16Q8NEE8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.2■□□□□ 0.98
TTC16Q8NEE8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.2■□□□□ 0.98
TTC16Q8NEE8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TTC16Q8NEE8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC16Q8NEE8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TTC16Q8NEE8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TTC16Q8NEE8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TTC16Q8NEE8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC16Q8NEE8 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.2■□□□□ 0.98
TTC16Q8NEE8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC16Q8NEE8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 PGM5P4-201ENST00000421970 445 ntBASIC21.19■□□□□ 0.98
TTC16Q8NEE8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 AL356652.1-201ENST00000615962 565 ntBASIC21.19■□□□□ 0.98
TTC16Q8NEE8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 AC006557.6-201ENST00000623071 864 ntBASIC21.19■□□□□ 0.98
TTC16Q8NEE8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 AF106564.1-201ENST00000607058 2553 ntBASIC21.19■□□□□ 0.98
TTC16Q8NEE8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC16Q8NEE8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.18■□□□□ 0.98
TTC16Q8NEE8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TTC16Q8NEE8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
TTC16Q8NEE8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms