Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF248Q8NDW4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF248Q8NDW4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 ARMC10P1-201ENST00000313754 855 ntBASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 KRT18P35-201ENST00000510488 1269 ntBASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF248Q8NDW4 FBXW4P1-201ENST00000426721 2239 ntBASIC19.33■□□□□ 0.69
ZNF248Q8NDW4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.33■□□□□ 0.69
ZNF248Q8NDW4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ZNF248Q8NDW4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.33■□□□□ 0.69
ZNF248Q8NDW4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF248Q8NDW4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF248Q8NDW4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 AC005829.2-201ENST00000571422 1056 ntBASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 RN7SL850P-201ENST00000579959 291 ntBASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 AL590326.2-201ENST00000625139 305 ntBASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF248Q8NDW4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF248Q8NDW4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 FAM99A-202ENST00000538190 1989 ntBASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms