Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
C3orf56Q8N813 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.83■□□□□ 0.12
C3orf56Q8N813 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.83■□□□□ 0.12
C3orf56Q8N813 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.83■□□□□ 0.12
C3orf56Q8N813 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.83■□□□□ 0.12
C3orf56Q8N813 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.83■□□□□ 0.12
C3orf56Q8N813 REXO1L10P-201ENST00000615707 1290 ntBASIC15.83■□□□□ 0.12
C3orf56Q8N813 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
C3orf56Q8N813 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C3orf56Q8N813 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C3orf56Q8N813 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C3orf56Q8N813 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
C3orf56Q8N813 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C3orf56Q8N813 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C3orf56Q8N813 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C3orf56Q8N813 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C3orf56Q8N813 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 SLC25A3P1-201ENST00000443844 931 ntBASIC15.82■□□□□ 0.12
C3orf56Q8N813 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.82■□□□□ 0.12
C3orf56Q8N813 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
C3orf56Q8N813 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.81■□□□□ 0.12
C3orf56Q8N813 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.81■□□□□ 0.12
C3orf56Q8N813 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
C3orf56Q8N813 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.81■□□□□ 0.12
C3orf56Q8N813 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.81■□□□□ 0.12
C3orf56Q8N813 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.81■□□□□ 0.12
C3orf56Q8N813 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
C3orf56Q8N813 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.81■□□□□ 0.12
C3orf56Q8N813 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
C3orf56Q8N813 AL356652.1-201ENST00000615962 565 ntBASIC15.81■□□□□ 0.12
C3orf56Q8N813 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C3orf56Q8N813 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.8■□□□□ 0.12
C3orf56Q8N813 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.8■□□□□ 0.12
C3orf56Q8N813 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 UPK3BP1-201ENST00000428678 509 ntBASIC15.8■□□□□ 0.12
C3orf56Q8N813 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.8■□□□□ 0.12
C3orf56Q8N813 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.8■□□□□ 0.12
C3orf56Q8N813 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.8■□□□□ 0.12
C3orf56Q8N813 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.8■□□□□ 0.12
C3orf56Q8N813 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.8■□□□□ 0.12
C3orf56Q8N813 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.8■□□□□ 0.12
C3orf56Q8N813 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
C3orf56Q8N813 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
C3orf56Q8N813 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.8■□□□□ 0.12
C3orf56Q8N813 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.8■□□□□ 0.12
C3orf56Q8N813 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C3orf56Q8N813 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms