Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 BICD1-207ENST00000551848 1962 ntBASIC15.15■□□□□ 0.02
HIST3H2BBQ8N257 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 AC090164.3-201ENST00000610780 2143 ntBASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2BBQ8N257 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 HNRNPLP2-201ENST00000568980 1570 ntBASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
HIST3H2BBQ8N257 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 AC046158.3-201ENST00000624947 2558 ntBASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 AL157400.5-201ENST00000507624 621 ntBASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST3H2BBQ8N257 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms