Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
XRN1Q8IZH2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
XRN1Q8IZH2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
XRN1Q8IZH2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
XRN1Q8IZH2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 NTF6B-201ENST00000591913 560 ntBASIC28.32■■■□□ 2.12
XRN1Q8IZH2 AC004264.1-201ENST00000608354 794 ntBASIC28.32■■■□□ 2.12
XRN1Q8IZH2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC28.32■■■□□ 2.12
XRN1Q8IZH2 C1QL1P1-201ENST00000568105 661 ntBASIC28.32■■■□□ 2.12
XRN1Q8IZH2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC28.31■■■□□ 2.12
XRN1Q8IZH2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC28.31■■■□□ 2.12
XRN1Q8IZH2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
XRN1Q8IZH2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
XRN1Q8IZH2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
XRN1Q8IZH2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
XRN1Q8IZH2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
XRN1Q8IZH2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
XRN1Q8IZH2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC28.31■■■□□ 2.12
XRN1Q8IZH2 KRT18P22-201ENST00000402024 1347 ntBASIC28.31■■■□□ 2.12
XRN1Q8IZH2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
XRN1Q8IZH2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
XRN1Q8IZH2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
XRN1Q8IZH2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
XRN1Q8IZH2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
XRN1Q8IZH2 WWOX-216ENST00000569818 525 ntBASIC28.3■■■□□ 2.12
XRN1Q8IZH2 AC026271.3-201ENST00000571884 352 ntBASIC28.3■■■□□ 2.12
XRN1Q8IZH2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC28.3■■■□□ 2.12
XRN1Q8IZH2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC28.3■■■□□ 2.12
XRN1Q8IZH2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC28.3■■■□□ 2.12
XRN1Q8IZH2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
XRN1Q8IZH2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
XRN1Q8IZH2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 AC010203.1-204ENST00000548782 407 ntBASIC28.29■■■□□ 2.12
XRN1Q8IZH2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 MESTP1-201ENST00000404287 994 ntBASIC28.29■■■□□ 2.12
XRN1Q8IZH2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
XRN1Q8IZH2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC28.28■■■□□ 2.12
XRN1Q8IZH2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC28.28■■■□□ 2.12
XRN1Q8IZH2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
XRN1Q8IZH2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
XRN1Q8IZH2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
XRN1Q8IZH2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC28.28■■■□□ 2.12
XRN1Q8IZH2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
XRN1Q8IZH2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC28.28■■■□□ 2.12
XRN1Q8IZH2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
XRN1Q8IZH2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
XRN1Q8IZH2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC28.27■■■□□ 2.12
XRN1Q8IZH2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
XRN1Q8IZH2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
XRN1Q8IZH2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC28.27■■■□□ 2.12
XRN1Q8IZH2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC28.27■■■□□ 2.12
XRN1Q8IZH2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
XRN1Q8IZH2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC28.27■■■□□ 2.12
XRN1Q8IZH2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC28.27■■■□□ 2.12
XRN1Q8IZH2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC28.27■■■□□ 2.12
XRN1Q8IZH2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
XRN1Q8IZH2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
XRN1Q8IZH2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC28.26■■■□□ 2.12
XRN1Q8IZH2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC28.26■■■□□ 2.12
XRN1Q8IZH2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
XRN1Q8IZH2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
XRN1Q8IZH2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
XRN1Q8IZH2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC28.26■■■□□ 2.11
XRN1Q8IZH2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC28.26■■■□□ 2.11
XRN1Q8IZH2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC28.26■■■□□ 2.11
XRN1Q8IZH2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
XRN1Q8IZH2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
XRN1Q8IZH2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms