Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 AC003102.1-202ENST00000563394 1796 ntBASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 AC121338.2-201ENST00000622535 1744 ntBASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 Z82202.1-201ENST00000623446 1880 ntBASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 HCG11-201ENST00000411553 5696 ntBASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 AC021242.3-201ENST00000607598 1377 ntBASIC18.3■□□□□ 0.52
CROCCP3Q8IVE0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 AL133373.2-201ENST00000623187 2828 ntBASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 AC093484.2-201ENST00000580996 2166 ntBASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CROCCP3Q8IVE0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CROCCP3Q8IVE0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 AC241377.3-202ENST00000626088 1088 ntBASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 AC241585.3-202ENST00000628937 1088 ntBASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 AC245100.8-202ENST00000629247 1058 ntBASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CROCCP3Q8IVE0 AC133637.1-201ENST00000624115 1537 ntBASIC18.27■□□□□ 0.51
CROCCP3Q8IVE0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CROCCP3Q8IVE0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.27■□□□□ 0.51
CROCCP3Q8IVE0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CROCCP3Q8IVE0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CROCCP3Q8IVE0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CROCCP3Q8IVE0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.27■□□□□ 0.51
CROCCP3Q8IVE0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms