Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 BX664725.1-201ENST00000438252 379 ntBASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 PVT1_1.1-201ENST00000615125 194 ntBASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
KCNIP4Q6PIL6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KCNIP4Q6PIL6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP4Q6PIL6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 KRT125P-201ENST00000546827 989 ntBASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP4Q6PIL6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 NFIC-211ENST00000641145 8399 ntBASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP4Q6PIL6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms