Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13DQ5THJ4 MESTP1-201ENST00000404287 994 ntBASIC13.73□□□□□ -0.21
VPS13DQ5THJ4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.73□□□□□ -0.21
VPS13DQ5THJ4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13DQ5THJ4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.73□□□□□ -0.21
VPS13DQ5THJ4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13DQ5THJ4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
VPS13DQ5THJ4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13DQ5THJ4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 AL390955.1-201ENST00000428694 934 ntBASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 AL353807.1-201ENST00000427475 662 ntBASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 AC006011.2-201ENST00000621313 1158 ntBASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13DQ5THJ4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 INGX-201ENST00000359239 846 ntBASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13DQ5THJ4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VPS13DQ5THJ4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
VPS13DQ5THJ4 KRT18P22-201ENST00000402024 1347 ntBASIC13.71□□□□□ -0.22
VPS13DQ5THJ4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VPS13DQ5THJ4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
VPS13DQ5THJ4 SLC25A3P1-201ENST00000443844 931 ntBASIC13.71□□□□□ -0.22
VPS13DQ5THJ4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.71□□□□□ -0.22
VPS13DQ5THJ4 NTF6B-201ENST00000591913 560 ntBASIC13.71□□□□□ -0.22
VPS13DQ5THJ4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC13.71□□□□□ -0.22
VPS13DQ5THJ4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.71□□□□□ -0.22
VPS13DQ5THJ4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 UNC93B2-201ENST00000285383 730 ntBASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13DQ5THJ4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 AC011484.1-201ENST00000377652 1995 ntBASIC13.69□□□□□ -0.22
VPS13DQ5THJ4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
VPS13DQ5THJ4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VPS13DQ5THJ4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VPS13DQ5THJ4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms