Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 AC093787.1-201ENST00000450396 207 ntBASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 AL162412.1-201ENST00000567129 965 ntBASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KHDC1Q4VXA5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 GUSBP6-202ENST00000438529 1198 ntBASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 AC083906.2-201ENST00000511578 360 ntBASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 RARRES2P4-201ENST00000514074 484 ntBASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 AC133552.2-202ENST00000575694 574 ntBASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 AC116050.2-201ENST00000612102 1779 ntBASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.41■□□□□ 0.86
KHDC1Q4VXA5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 AC007322.3-201ENST00000426526 701 ntBASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KHDC1Q4VXA5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KHDC1Q4VXA5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
KHDC1Q4VXA5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KHDC1Q4VXA5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KHDC1Q4VXA5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KHDC1Q4VXA5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.39■□□□□ 0.86
KHDC1Q4VXA5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.86
KHDC1Q4VXA5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 HLA-L-209ENST00000420110 1011 ntBASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 AC105036.2-201ENST00000569468 176 ntBASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 FAM21FP-204ENST00000608637 956 ntBASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 AL121832.2-201ENST00000610979 668 ntBASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 PLK5-205ENST00000642079 1969 ntBASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KHDC1Q4VXA5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms