Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1EQ15878 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 AL355355.2-201ENST00000442321 338 ntBASIC19.81■□□□□ 0.76
CACNA1EQ15878 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CACNA1EQ15878 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 AC023632.3-201ENST00000521633 145 ntBASIC19.8■□□□□ 0.76
CACNA1EQ15878 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CACNA1EQ15878 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.8■□□□□ 0.76
CACNA1EQ15878 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.8■□□□□ 0.76
CACNA1EQ15878 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.8■□□□□ 0.76
CACNA1EQ15878 HTR7P1-201ENST00000538670 1336 ntBASIC19.8■□□□□ 0.76
CACNA1EQ15878 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.8■□□□□ 0.76
CACNA1EQ15878 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.8■□□□□ 0.76
CACNA1EQ15878 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA1EQ15878 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.8■□□□□ 0.76
CACNA1EQ15878 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.8■□□□□ 0.76
CACNA1EQ15878 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CACNA1EQ15878 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CACNA1EQ15878 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.79■□□□□ 0.76
CACNA1EQ15878 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CACNA1EQ15878 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CACNA1EQ15878 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.79■□□□□ 0.76
CACNA1EQ15878 RBM17P1-201ENST00000453646 1190 ntBASIC19.79■□□□□ 0.76
CACNA1EQ15878 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.79■□□□□ 0.76
CACNA1EQ15878 AC079598.2-202ENST00000546624 1451 ntBASIC19.79■□□□□ 0.76
CACNA1EQ15878 KRT8P36-201ENST00000489121 1440 ntBASIC19.79■□□□□ 0.76
CACNA1EQ15878 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.79■□□□□ 0.76
CACNA1EQ15878 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CACNA1EQ15878 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CACNA1EQ15878 FAM197Y1-201ENST00000421178 764 ntBASIC19.79■□□□□ 0.76
CACNA1EQ15878 AL390955.1-201ENST00000428694 934 ntBASIC19.79■□□□□ 0.76
CACNA1EQ15878 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.79■□□□□ 0.76
CACNA1EQ15878 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
CACNA1EQ15878 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.79■□□□□ 0.76
CACNA1EQ15878 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.79■□□□□ 0.76
CACNA1EQ15878 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CACNA1EQ15878 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.78■□□□□ 0.76
CACNA1EQ15878 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.78■□□□□ 0.76
CACNA1EQ15878 AL590326.2-201ENST00000625139 305 ntBASIC19.78■□□□□ 0.76
CACNA1EQ15878 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CACNA1EQ15878 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CACNA1EQ15878 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CACNA1EQ15878 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.78■□□□□ 0.76
CACNA1EQ15878 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.77■□□□□ 0.76
CACNA1EQ15878 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.77■□□□□ 0.76
CACNA1EQ15878 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
CACNA1EQ15878 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CACNA1EQ15878 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CACNA1EQ15878 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CACNA1EQ15878 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.77■□□□□ 0.76
CACNA1EQ15878 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CACNA1EQ15878 AC005521.1-201ENST00000393351 872 ntBASIC19.77■□□□□ 0.76
CACNA1EQ15878 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.77■□□□□ 0.76
CACNA1EQ15878 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.77■□□□□ 0.76
CACNA1EQ15878 C2orf69P3-201ENST00000565542 1120 ntBASIC19.77■□□□□ 0.76
CACNA1EQ15878 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.77■□□□□ 0.76
CACNA1EQ15878 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.77■□□□□ 0.76
CACNA1EQ15878 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CACNA1EQ15878 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CACNA1EQ15878 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CACNA1EQ15878 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CACNA1EQ15878 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CACNA1EQ15878 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CACNA1EQ15878 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.76■□□□□ 0.75
CACNA1EQ15878 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.76■□□□□ 0.75
CACNA1EQ15878 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.76■□□□□ 0.75
CACNA1EQ15878 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.76■□□□□ 0.75
CACNA1EQ15878 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
CACNA1EQ15878 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.76■□□□□ 0.75
CACNA1EQ15878 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CACNA1EQ15878 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CACNA1EQ15878 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CACNA1EQ15878 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.76■□□□□ 0.75
CACNA1EQ15878 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.76■□□□□ 0.75
CACNA1EQ15878 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CACNA1EQ15878 AC004264.1-201ENST00000608354 794 ntBASIC19.76■□□□□ 0.75
CACNA1EQ15878 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CACNA1EQ15878 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CACNA1EQ15878 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CACNA1EQ15878 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CACNA1EQ15878 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.75■□□□□ 0.75
CACNA1EQ15878 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms