Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SF3A2Q15428 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SF3A2Q15428 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SF3A2Q15428 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.05■□□□□ 0.8
SF3A2Q15428 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SF3A2Q15428 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SF3A2Q15428 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SF3A2Q15428 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SF3A2Q15428 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.05■□□□□ 0.8
SF3A2Q15428 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.05■□□□□ 0.8
SF3A2Q15428 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.05■□□□□ 0.8
SF3A2Q15428 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.05■□□□□ 0.8
SF3A2Q15428 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SF3A2Q15428 NTF6B-201ENST00000591913 560 ntBASIC20.05■□□□□ 0.8
SF3A2Q15428 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.05■□□□□ 0.8
SF3A2Q15428 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.05■□□□□ 0.8
SF3A2Q15428 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.05■□□□□ 0.8
SF3A2Q15428 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.05■□□□□ 0.8
SF3A2Q15428 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SF3A2Q15428 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.05■□□□□ 0.8
SF3A2Q15428 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SF3A2Q15428 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.05■□□□□ 0.8
SF3A2Q15428 LINC01568-207ENST00000641790 1380 ntBASIC20.05■□□□□ 0.8
SF3A2Q15428 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SF3A2Q15428 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SF3A2Q15428 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SF3A2Q15428 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SF3A2Q15428 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SF3A2Q15428 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.04■□□□□ 0.8
SF3A2Q15428 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SF3A2Q15428 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SF3A2Q15428 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SF3A2Q15428 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SF3A2Q15428 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.04■□□□□ 0.8
SF3A2Q15428 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.04■□□□□ 0.8
SF3A2Q15428 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.04■□□□□ 0.8
SF3A2Q15428 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.04■□□□□ 0.8
SF3A2Q15428 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.04■□□□□ 0.8
SF3A2Q15428 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.04■□□□□ 0.8
SF3A2Q15428 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.04■□□□□ 0.8
SF3A2Q15428 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.04■□□□□ 0.8
SF3A2Q15428 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.04■□□□□ 0.8
SF3A2Q15428 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SF3A2Q15428 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SF3A2Q15428 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SF3A2Q15428 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.04■□□□□ 0.8
SF3A2Q15428 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SF3A2Q15428 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.03■□□□□ 0.8
SF3A2Q15428 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SF3A2Q15428 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SF3A2Q15428 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SF3A2Q15428 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.03■□□□□ 0.8
SF3A2Q15428 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SF3A2Q15428 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SF3A2Q15428 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SF3A2Q15428 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SF3A2Q15428 MIR1238-201ENST00000408483 83 ntBASIC20.03■□□□□ 0.8
SF3A2Q15428 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.03■□□□□ 0.8
SF3A2Q15428 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.03■□□□□ 0.8
SF3A2Q15428 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.03■□□□□ 0.8
SF3A2Q15428 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.03■□□□□ 0.8
SF3A2Q15428 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SF3A2Q15428 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.03■□□□□ 0.8
SF3A2Q15428 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SF3A2Q15428 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.03■□□□□ 0.8
SF3A2Q15428 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.02■□□□□ 0.8
SF3A2Q15428 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.02■□□□□ 0.8
SF3A2Q15428 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SF3A2Q15428 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SF3A2Q15428 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SF3A2Q15428 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
SF3A2Q15428 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SF3A2Q15428 KRT16P5-201ENST00000455284 522 ntBASIC20.02■□□□□ 0.8
SF3A2Q15428 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SF3A2Q15428 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.02■□□□□ 0.8
SF3A2Q15428 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SF3A2Q15428 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.02■□□□□ 0.8
SF3A2Q15428 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SF3A2Q15428 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SF3A2Q15428 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
SF3A2Q15428 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SF3A2Q15428 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SF3A2Q15428 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SF3A2Q15428 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SF3A2Q15428 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SF3A2Q15428 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SF3A2Q15428 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.01■□□□□ 0.79
SF3A2Q15428 UNC93B2-201ENST00000285383 730 ntBASIC20.01■□□□□ 0.79
SF3A2Q15428 TERF1P1-201ENST00000311003 1181 ntBASIC20.01■□□□□ 0.79
SF3A2Q15428 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.01■□□□□ 0.79
SF3A2Q15428 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SF3A2Q15428 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.01■□□□□ 0.79
SF3A2Q15428 AL353807.1-201ENST00000427475 662 ntBASIC20.01■□□□□ 0.79
SF3A2Q15428 AL137013.1-201ENST00000432946 1228 ntBASIC20.01■□□□□ 0.79
SF3A2Q15428 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SF3A2Q15428 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.01■□□□□ 0.79
SF3A2Q15428 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.01■□□□□ 0.79
SF3A2Q15428 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.01■□□□□ 0.79
SF3A2Q15428 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SF3A2Q15428 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms