Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHA4P54764 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
EPHA4P54764 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHA4P54764 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EPHA4P54764 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHA4P54764 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.51■□□□□ 0.71
EPHA4P54764 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.5■□□□□ 0.71
EPHA4P54764 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.5■□□□□ 0.71
EPHA4P54764 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.5■□□□□ 0.71
EPHA4P54764 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.5■□□□□ 0.71
EPHA4P54764 AL121603.2-201ENST00000557373 2117 ntBASIC19.5■□□□□ 0.71
EPHA4P54764 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.5■□□□□ 0.71
EPHA4P54764 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.5■□□□□ 0.71
EPHA4P54764 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.5■□□□□ 0.71
EPHA4P54764 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.5■□□□□ 0.71
EPHA4P54764 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.5■□□□□ 0.71
EPHA4P54764 MTDHP1-201ENST00000605323 784 ntBASIC19.5■□□□□ 0.71
EPHA4P54764 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.5■□□□□ 0.71
EPHA4P54764 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.5■□□□□ 0.71
EPHA4P54764 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.5■□□□□ 0.71
EPHA4P54764 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
EPHA4P54764 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.5■□□□□ 0.71
EPHA4P54764 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHA4P54764 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHA4P54764 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EPHA4P54764 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.49■□□□□ 0.71
EPHA4P54764 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.49■□□□□ 0.71
EPHA4P54764 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
EPHA4P54764 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
EPHA4P54764 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.49■□□□□ 0.71
EPHA4P54764 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
EPHA4P54764 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.49■□□□□ 0.71
EPHA4P54764 RPS2P4-201ENST00000476944 856 ntBASIC19.49■□□□□ 0.71
EPHA4P54764 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
EPHA4P54764 AC008550.1-201ENST00000511500 884 ntBASIC19.49■□□□□ 0.71
EPHA4P54764 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHA4P54764 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHA4P54764 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHA4P54764 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHA4P54764 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EPHA4P54764 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EPHA4P54764 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
EPHA4P54764 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.49■□□□□ 0.71
EPHA4P54764 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.48■□□□□ 0.71
EPHA4P54764 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.48■□□□□ 0.71
EPHA4P54764 MIR718-201ENST00000390190 70 ntBASIC19.48■□□□□ 0.71
EPHA4P54764 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.48■□□□□ 0.71
EPHA4P54764 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.48■□□□□ 0.71
EPHA4P54764 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.48■□□□□ 0.71
EPHA4P54764 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
EPHA4P54764 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.48■□□□□ 0.71
EPHA4P54764 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.48■□□□□ 0.71
EPHA4P54764 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHA4P54764 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.48■□□□□ 0.71
EPHA4P54764 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
EPHA4P54764 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
EPHA4P54764 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.48■□□□□ 0.71
EPHA4P54764 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHA4P54764 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHA4P54764 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.47■□□□□ 0.71
EPHA4P54764 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHA4P54764 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
EPHA4P54764 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.47■□□□□ 0.71
EPHA4P54764 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHA4P54764 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.47■□□□□ 0.71
EPHA4P54764 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.47■□□□□ 0.71
EPHA4P54764 AC133681.1-201ENST00000465482 601 ntBASIC19.47■□□□□ 0.71
EPHA4P54764 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
EPHA4P54764 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.47■□□□□ 0.71
EPHA4P54764 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms