Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PMS2P54278 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.83■□□□□ 0.93
PMS2P54278 AC105233.4-201ENST00000642045 216 ntBASIC20.83■□□□□ 0.93
PMS2P54278 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMS2P54278 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PMS2P54278 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
PMS2P54278 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.83■□□□□ 0.92
PMS2P54278 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.83■□□□□ 0.92
PMS2P54278 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS2P54278 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS2P54278 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PMS2P54278 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PMS2P54278 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS2P54278 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PMS2P54278 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS2P54278 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PMS2P54278 MIR572-201ENST00000384983 95 ntBASIC20.82■□□□□ 0.92
PMS2P54278 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.82■□□□□ 0.92
PMS2P54278 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.82■□□□□ 0.92
PMS2P54278 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PMS2P54278 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PMS2P54278 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.82■□□□□ 0.92
PMS2P54278 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS2P54278 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS2P54278 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PMS2P54278 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.82■□□□□ 0.92
PMS2P54278 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS2P54278 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PMS2P54278 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.82■□□□□ 0.92
PMS2P54278 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS2P54278 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS2P54278 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS2P54278 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS2P54278 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PMS2P54278 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS2P54278 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PMS2P54278 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.81■□□□□ 0.92
PMS2P54278 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.81■□□□□ 0.92
PMS2P54278 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.81■□□□□ 0.92
PMS2P54278 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS2P54278 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PMS2P54278 AL354811.1-201ENST00000610286 706 ntBASIC20.81■□□□□ 0.92
PMS2P54278 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.81■□□□□ 0.92
PMS2P54278 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.81■□□□□ 0.92
PMS2P54278 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.81■□□□□ 0.92
PMS2P54278 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS2P54278 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PMS2P54278 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PMS2P54278 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS2P54278 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PMS2P54278 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS2P54278 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS2P54278 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PMS2P54278 AP000974.1-201ENST00000623909 2387 ntBASIC20.8■□□□□ 0.92
PMS2P54278 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS2P54278 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PMS2P54278 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS2P54278 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
PMS2P54278 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PMS2P54278 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.8■□□□□ 0.92
PMS2P54278 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PMS2P54278 AC012414.1-201ENST00000556676 535 ntBASIC20.8■□□□□ 0.92
PMS2P54278 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.8■□□□□ 0.92
PMS2P54278 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.8■□□□□ 0.92
PMS2P54278 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS2P54278 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.8■□□□□ 0.92
PMS2P54278 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS2P54278 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS2P54278 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.79■□□□□ 0.92
PMS2P54278 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PMS2P54278 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PMS2P54278 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.79■□□□□ 0.92
PMS2P54278 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.79■□□□□ 0.92
PMS2P54278 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PMS2P54278 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.79■□□□□ 0.92
PMS2P54278 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 MIR2861-201ENST00000636310 90 ntBASIC20.79■□□□□ 0.92
PMS2P54278 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
PMS2P54278 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PMS2P54278 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS2P54278 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PMS2P54278 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS2P54278 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS2P54278 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS2P54278 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PMS2P54278 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.78■□□□□ 0.92
PMS2P54278 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PMS2P54278 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms