Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 YMR247W-AYMR247W-A 144 nt1.83□□□□□ -2.12
NDE1P40215 OSH6YKR003W 1347 nt1.83□□□□□ -2.12
NDE1P40215 PEX8YGR077C 1770 nt1.82□□□□□ -2.12
NDE1P40215 RPL31AYDL075W 342 nt1.82□□□□□ -2.12
NDE1P40215 YDR008CYDR008C 351 nt1.82□□□□□ -2.12
NDE1P40215 YDR509WYDR509W 348 nt1.82□□□□□ -2.12
NDE1P40215 snR41snR41 95 nt1.82□□□□□ -2.12
NDE1P40215 KCS1YDR017C 3153 nt1.82□□□□□ -2.12
NDE1P40215 YOR343W-BYOR343W-B 5313 nt1.81□□□□□ -2.12
NDE1P40215 YHR210CYHR210C 1026 nt1.81□□□□□ -2.12
NDE1P40215 PAU18YLL064C 363 nt1.81□□□□□ -2.12
NDE1P40215 PAU6YNR076W 363 nt1.81□□□□□ -2.12
NDE1P40215 HHT1YBR010W 411 nt1.81□□□□□ -2.12
NDE1P40215 LRE1YCL051W 1752 nt1.8□□□□□ -2.12
NDE1P40215 SWI5YDR146C 2130 nt1.8□□□□□ -2.12
NDE1P40215 YLR146W-AYLR146W-A 189 nt1.8□□□□□ -2.12
NDE1P40215 YMR153C-AYMR153C-A 336 nt1.8□□□□□ -2.12
NDE1P40215 TOM22YNL131W 459 nt1.8□□□□□ -2.12
NDE1P40215 DIE2YGR227W 1578 nt1.8□□□□□ -2.12
NDE1P40215 SFB2YNL049C 2631 nt1.8□□□□□ -2.12
NDE1P40215 VPS15YBR097W 4365 nt1.79□□□□□ -2.12
NDE1P40215 YHR139C-AYHR139C-A 312 nt1.79□□□□□ -2.12
NDE1P40215 YOR392WYOR392W 444 nt1.79□□□□□ -2.12
NDE1P40215 MKT1YNL085W 2493 nt1.79□□□□□ -2.12
NDE1P40215 YCS4YLR272C 3531 nt1.78□□□□□ -2.12
NDE1P40215 SWI6YLR182W 2412 nt1.78□□□□□ -2.12
NDE1P40215 YHL009W-AYHL009W-A 1242 nt1.78□□□□□ -2.12
NDE1P40215 CLU1YMR012W 3834 nt1.78□□□□□ -2.12
NDE1P40215 ZIP1YDR285W 2628 nt1.78□□□□□ -2.12
NDE1P40215 PEP1YBL017C 4740 nt1.78□□□□□ -2.13
NDE1P40215 EMC5YIL027C 426 nt1.77□□□□□ -2.13
NDE1P40215 YMR272W-BYMR272W-B 108 nt1.77□□□□□ -2.13
NDE1P40215 YPL205CYPL205C 345 nt1.77□□□□□ -2.13
NDE1P40215 BST1YFL025C 3090 nt1.77□□□□□ -2.13
NDE1P40215 VPS34YLR240W 2628 nt1.76□□□□□ -2.13
NDE1P40215 RPS27AYKL156W 249 nt1.76□□□□□ -2.13
NDE1P40215 RUF22RUF22 515 nt1.76□□□□□ -2.13
NDE1P40215 CDC33YOL139C 642 nt1.76□□□□□ -2.13
NDE1P40215 YCL046WYCL046W 324 nt1.76□□□□□ -2.13
NDE1P40215 MLH3YPL164C 2148 nt1.76□□□□□ -2.13
NDE1P40215 YIL066W-AYIL066W-A 444 nt1.75□□□□□ -2.13
NDE1P40215 YLR287CYLR287C 1068 nt1.75□□□□□ -2.13
NDE1P40215 YBL071CYBL071C 309 nt1.75□□□□□ -2.13
NDE1P40215 MYO2YOR326W 4725 nt1.75□□□□□ -2.13
NDE1P40215 NCA2YPR155C 1851 nt1.75□□□□□ -2.13
NDE1P40215 FIG2YCR089W 4830 nt1.73□□□□□ -2.13
NDE1P40215 YDR114CYDR114C 303 nt1.73□□□□□ -2.13
NDE1P40215 YLR255CYLR255C 354 nt1.73□□□□□ -2.13
NDE1P40215 RTP1YMR185W 2946 nt1.73□□□□□ -2.13
NDE1P40215 DGR2YKL121W 2559 nt1.72□□□□□ -2.13
NDE1P40215 GUP1YGL084C 1683 nt1.72□□□□□ -2.13
NDE1P40215 YDL011CYDL011C 324 nt1.72□□□□□ -2.13
NDE1P40215 YNL324WYNL324W 396 nt1.72□□□□□ -2.13
NDE1P40215 YOR032W-AYOR032W-A 201 nt1.72□□□□□ -2.13
NDE1P40215 SPO23YBR250W 1572 nt1.72□□□□□ -2.13
NDE1P40215 RTR1YER139C 681 nt1.71□□□□□ -2.14
NDE1P40215 RPL32YBL092W 393 nt1.71□□□□□ -2.14
NDE1P40215 YOL159C-AYOL159C-A 273 nt1.71□□□□□ -2.14
NDE1P40215 YOP1YPR028W 543 nt1.71□□□□□ -2.14
NDE1P40215 YOR093CYOR093C 4947 nt1.71□□□□□ -2.14
NDE1P40215 SBE22YHR103W 2559 nt1.7□□□□□ -2.14
NDE1P40215 LYS14YDR034C 2373 nt1.7□□□□□ -2.14
NDE1P40215 SXM1YDR395W 2835 nt1.7□□□□□ -2.14
NDE1P40215 RVS161YCR009C 798 nt1.7□□□□□ -2.14
NDE1P40215 TIM13YGR181W 318 nt1.7□□□□□ -2.14
NDE1P40215 YIL059CYIL059C 366 nt1.7□□□□□ -2.14
NDE1P40215 PHS1YJL097W 654 nt1.7□□□□□ -2.14
NDE1P40215 HIT1YJR055W 495 nt1.7□□□□□ -2.14
NDE1P40215 SLY1YDR189W 2001 nt1.69□□□□□ -2.14
NDE1P40215 RTT102YGR275W 474 nt1.69□□□□□ -2.14
NDE1P40215 KAP122YGL016W 3246 nt1.68□□□□□ -2.14
NDE1P40215 YDR003W-AYDR003W-A 123 nt1.68□□□□□ -2.14
NDE1P40215 VPS55YJR044C 423 nt1.68□□□□□ -2.14
NDE1P40215 MRPL50YNR022C 420 nt1.68□□□□□ -2.14
NDE1P40215 ALK1YGL021W 2283 nt1.68□□□□□ -2.14
NDE1P40215 PXA2YKL188C 2562 nt1.67□□□□□ -2.14
NDE1P40215 UFD2YDL190C 2886 nt1.67□□□□□ -2.14
NDE1P40215 YJL022WYJL022W 309 nt1.67□□□□□ -2.14
NDE1P40215 COF1YLL050C 432 nt1.67□□□□□ -2.14
NDE1P40215 YLR406C-AYLR406C-A 150 nt1.67□□□□□ -2.14
NDE1P40215 FYV12YOR183W 390 nt1.67□□□□□ -2.14
NDE1P40215 MSN5YDR335W 3675 nt1.67□□□□□ -2.14
NDE1P40215 DNF3YMR162C 4971 nt1.66□□□□□ -2.14
NDE1P40215 EFR3YMR212C 2349 nt1.66□□□□□ -2.14
NDE1P40215 CFT1YDR301W 4074 nt1.66□□□□□ -2.14
NDE1P40215 CBS1YDL069C 690 nt1.66□□□□□ -2.14
NDE1P40215 YDR269CYDR269C 324 nt1.66□□□□□ -2.14
NDE1P40215 SDH7YDR511W 402 nt1.66□□□□□ -2.14
NDE1P40215 PRE4YFR050C 801 nt1.66□□□□□ -2.14
NDE1P40215 YOR146WYOR146W 306 nt1.66□□□□□ -2.14
NDE1P40215 YOR161W-BYOR161W-B 261 nt1.66□□□□□ -2.14
NDE1P40215 RFX1YLR176C 2436 nt1.66□□□□□ -2.14
NDE1P40215 AIM9YER080W 1884 nt1.65□□□□□ -2.14
NDE1P40215 GDS1YOR355W 1569 nt1.65□□□□□ -2.15
NDE1P40215 YKL202WYKL202W 582 nt1.65□□□□□ -2.15
NDE1P40215 RPL40BYKR094C 387 nt1.65□□□□□ -2.15
NDE1P40215 YLR140WYLR140W 327 nt1.65□□□□□ -2.15
NDE1P40215 CHS1YNL192W 3396 nt1.65□□□□□ -2.15
NDE1P40215 YOR192C-CYOR192C-C 237 nt1.64□□□□□ -2.15
NDE1P40215 YOR376WYOR376W 369 nt1.64□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 81.7 ms