Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 GIP3YPL137C 3831 nt2.22□□□□□ -2.05
VPS41P38959 TOR2YKL203C 7425 nt2.22□□□□□ -2.05
VPS41P38959 RPL35AYDL191W 363 nt2.21□□□□□ -2.06
VPS41P38959 YFL063WYFL063W 456 nt2.21□□□□□ -2.06
VPS41P38959 YGL149WYGL149W 306 nt2.21□□□□□ -2.06
VPS41P38959 YHR007C-AYHR007C-A 216 nt2.21□□□□□ -2.06
VPS41P38959 OST1YJL002C 1431 nt2.21□□□□□ -2.06
VPS41P38959 YPR099CYPR099C 357 nt2.21□□□□□ -2.06
VPS41P38959 YBR277CYBR277C 402 nt2.21□□□□□ -2.06
VPS41P38959 SIR4YDR227W 4077 nt2.2□□□□□ -2.06
VPS41P38959 RRP6YOR001W 2202 nt2.2□□□□□ -2.06
VPS41P38959 MF(ALPHA)1YPL187W 498 nt2.2□□□□□ -2.06
VPS41P38959 NEO1YIL048W 3456 nt2.19□□□□□ -2.06
VPS41P38959 CSN9YDR179C 489 nt2.19□□□□□ -2.06
VPS41P38959 NOP10YHR072W-A 177 nt2.19□□□□□ -2.06
VPS41P38959 TAR1YLR154W-C 375 nt2.19□□□□□ -2.06
VPS41P38959 VPH1YOR270C 2523 nt2.19□□□□□ -2.06
VPS41P38959 SAP190YKR028W 3102 nt2.18□□□□□ -2.06
VPS41P38959 SMD1YGR074W 441 nt2.18□□□□□ -2.06
VPS41P38959 YHR063W-AYHR063W-A 336 nt2.18□□□□□ -2.06
VPS41P38959 YHR071C-AYHR071C-A 321 nt2.18□□□□□ -2.06
VPS41P38959 snR51snR51 107 nt2.18□□□□□ -2.06
VPS41P38959 PAN3YKL025C 2040 nt2.18□□□□□ -2.06
VPS41P38959 DFG16YOR030W 1860 nt2.18□□□□□ -2.06
VPS41P38959 TOF2YKR010C 2316 nt2.17□□□□□ -2.06
VPS41P38959 VPS35YJL154C 2835 nt2.17□□□□□ -2.06
VPS41P38959 DIS3YOL021C 3006 nt2.17□□□□□ -2.06
VPS41P38959 YDR048CYDR048C 315 nt2.17□□□□□ -2.06
VPS41P38959 YHL041WYHL041W 450 nt2.17□□□□□ -2.06
VPS41P38959 UBR2YLR024C 5619 nt2.17□□□□□ -2.06
VPS41P38959 SMY1YKL079W 1971 nt2.17□□□□□ -2.06
VPS41P38959 ALK2YBL009W 2031 nt2.17□□□□□ -2.06
VPS41P38959 TUS1YLR425W 3924 nt2.16□□□□□ -2.06
VPS41P38959 YIL059CYIL059C 366 nt2.16□□□□□ -2.06
VPS41P38959 VPS8YAL002W 3825 nt2.16□□□□□ -2.06
VPS41P38959 HTB2YBL002W 396 nt2.16□□□□□ -2.06
VPS41P38959 RIC1YLR039C 3171 nt2.16□□□□□ -2.06
VPS41P38959 UTP22YGR090W 3714 nt2.16□□□□□ -2.06
VPS41P38959 HER1YOR227W 3741 nt2.15□□□□□ -2.06
VPS41P38959 MGA2YIR033W 3342 nt2.15□□□□□ -2.07
VPS41P38959 SNC1YAL030W 354 nt2.15□□□□□ -2.07
VPS41P38959 SAR1YPL218W 573 nt2.15□□□□□ -2.07
VPS41P38959 BUB1YGR188C 3066 nt2.15□□□□□ -2.07
VPS41P38959 YGL069CYGL069C 465 nt2.14□□□□□ -2.07
VPS41P38959 TMA7YLR262C-A 195 nt2.14□□□□□ -2.07
VPS41P38959 YBR224WYBR224W 516 nt2.14□□□□□ -2.07
VPS41P38959 YBR184WYBR184W 1572 nt2.14□□□□□ -2.07
VPS41P38959 LYS9YNR050C 1341 nt2.14□□□□□ -2.07
VPS41P38959 SET2YJL168C 2202 nt2.13□□□□□ -2.07
VPS41P38959 YJL015CYJL015C 285 nt2.13□□□□□ -2.07
VPS41P38959 YBL012CYBL012C 402 nt2.13□□□□□ -2.07
VPS41P38959 CRM1YGR218W 3255 nt2.13□□□□□ -2.07
VPS41P38959 ATG9YDL149W 2994 nt2.13□□□□□ -2.07
VPS41P38959 PDR8YLR266C 2106 nt2.12□□□□□ -2.07
VPS41P38959 GUP1YGL084C 1683 nt2.12□□□□□ -2.07
VPS41P38959 TRL1YJL087C 2484 nt2.12□□□□□ -2.07
VPS41P38959 VMR1YHL035C 4779 nt2.12□□□□□ -2.07
VPS41P38959 MCM22YJR135C 720 nt2.12□□□□□ -2.07
VPS41P38959 MNL2YLR057W 2550 nt2.12□□□□□ -2.07
VPS41P38959 PEX8YGR077C 1770 nt2.12□□□□□ -2.07
VPS41P38959 VTC3YPL019C 2508 nt2.12□□□□□ -2.07
VPS41P38959 DBP6YNR038W 1890 nt2.11□□□□□ -2.07
VPS41P38959 SEF1YBL066C 3447 nt2.11□□□□□ -2.07
VPS41P38959 PEP3YLR148W 2757 nt2.11□□□□□ -2.07
VPS41P38959 RTT107YHR154W 3213 nt2.11□□□□□ -2.07
VPS41P38959 CDC60YPL160W 3273 nt2.11□□□□□ -2.07
VPS41P38959 RPA34YJL148W 702 nt2.11□□□□□ -2.07
VPS41P38959 YPL152W-AYPL152W-A 99 nt2.11□□□□□ -2.07
VPS41P38959 APL5YPL195W 2799 nt2.11□□□□□ -2.07
VPS41P38959 OSH6YKR003W 1347 nt2.11□□□□□ -2.07
VPS41P38959 HDA3YPR179C 1968 nt2.1□□□□□ -2.07
VPS41P38959 CDC27YBL084C 2277 nt2.1□□□□□ -2.07
VPS41P38959 GCN2YDR283C 4980 nt2.1□□□□□ -2.07
VPS41P38959 AGC1YPR021C 2709 nt2.1□□□□□ -2.07
VPS41P38959 NUP170YBL079W 4509 nt2.1□□□□□ -2.07
VPS41P38959 YLR149CYLR149C 2193 nt2.09□□□□□ -2.07
VPS41P38959 RIM20YOR275C 1986 nt2.09□□□□□ -2.07
VPS41P38959 HTL1YCR020W-B 237 nt2.09□□□□□ -2.07
VPS41P38959 YGR069WYGR069W 336 nt2.09□□□□□ -2.07
VPS41P38959 RPL36BYPL249C-A 303 nt2.09□□□□□ -2.07
VPS41P38959 EFR3YMR212C 2349 nt2.09□□□□□ -2.07
VPS41P38959 CAT2YML042W 2013 nt2.08□□□□□ -2.08
VPS41P38959 RPL42BYHR141C 321 nt2.08□□□□□ -2.08
VPS41P38959 RPL42AYNL162W 321 nt2.08□□□□□ -2.08
VPS41P38959 YOP1YPR028W 543 nt2.08□□□□□ -2.08
VPS41P38959 MET18YIL128W 3099 nt2.08□□□□□ -2.08
VPS41P38959 BUD2YKL092C 3315 nt2.07□□□□□ -2.08
VPS41P38959 YMR045CYMR045C 5268 nt2.07□□□□□ -2.08
VPS41P38959 NAB6YML117W 3405 nt2.07□□□□□ -2.08
VPS41P38959 YDR344CYDR344C 444 nt2.07□□□□□ -2.08
VPS41P38959 CYC7YEL039C 342 nt2.07□□□□□ -2.08
VPS41P38959 HHT1YBR010W 411 nt2.07□□□□□ -2.08
VPS41P38959 GRR1YJR090C 3456 nt2.07□□□□□ -2.08
VPS41P38959 KOG1YHR186C 4674 nt2.07□□□□□ -2.08
VPS41P38959 YDL211CYDL211C 1119 nt2.06□□□□□ -2.08
VPS41P38959 PRE4YFR050C 801 nt2.06□□□□□ -2.08
VPS41P38959 YIL102CYIL102C 306 nt2.06□□□□□ -2.08
VPS41P38959 PUT3YKL015W 2940 nt2.06□□□□□ -2.08
VPS41P38959 VPS34YLR240W 2628 nt2.05□□□□□ -2.08
VPS41P38959 LRE1YCL051W 1752 nt2.05□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 48.5 ms