Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HMGCLP35914 AL512408.1-201ENST00000569378 2000 ntBASIC20.16■□□□□ 0.82
HMGCLP35914 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLP35914 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLP35914 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLP35914 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.16■□□□□ 0.82
HMGCLP35914 AC097658.1-201ENST00000475555 843 ntBASIC20.16■□□□□ 0.82
HMGCLP35914 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLP35914 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGCLP35914 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.16■□□□□ 0.82
HMGCLP35914 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGCLP35914 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLP35914 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLP35914 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HMGCLP35914 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLP35914 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLP35914 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGCLP35914 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGCLP35914 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HMGCLP35914 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
HMGCLP35914 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
HMGCLP35914 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGCLP35914 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCLP35914 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.15■□□□□ 0.82
HMGCLP35914 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HMGCLP35914 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.15■□□□□ 0.82
HMGCLP35914 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.15■□□□□ 0.82
HMGCLP35914 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 AC098934.4-201ENST00000564127 592 ntBASIC20.15■□□□□ 0.82
HMGCLP35914 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGCLP35914 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HMGCLP35914 PTBP1P-201ENST00000554374 1601 ntBASIC20.15■□□□□ 0.82
HMGCLP35914 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGCLP35914 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 SMG8-203ENST00000578922 2178 ntBASIC20.15■□□□□ 0.82
HMGCLP35914 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.15■□□□□ 0.82
HMGCLP35914 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HMGCLP35914 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMGCLP35914 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
HMGCLP35914 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HMGCLP35914 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HMGCLP35914 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
HMGCLP35914 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCLP35914 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
HMGCLP35914 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGCLP35914 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCLP35914 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCLP35914 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCLP35914 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGCLP35914 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.14■□□□□ 0.81
HMGCLP35914 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.14■□□□□ 0.81
HMGCLP35914 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
HMGCLP35914 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.14■□□□□ 0.81
HMGCLP35914 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
HMGCLP35914 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HMGCLP35914 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.14■□□□□ 0.81
HMGCLP35914 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.13■□□□□ 0.81
HMGCLP35914 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCLP35914 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCLP35914 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCLP35914 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCLP35914 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HMGCLP35914 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCLP35914 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.13■□□□□ 0.81
HMGCLP35914 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCLP35914 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.13■□□□□ 0.81
HMGCLP35914 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.13■□□□□ 0.81
HMGCLP35914 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCLP35914 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGCLP35914 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.12■□□□□ 0.81
HMGCLP35914 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGCLP35914 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGCLP35914 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGCLP35914 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGCLP35914 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HMGCLP35914 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGCLP35914 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.12■□□□□ 0.81
HMGCLP35914 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HMGCLP35914 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.12■□□□□ 0.81
HMGCLP35914 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.12■□□□□ 0.81
HMGCLP35914 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.12■□□□□ 0.81
HMGCLP35914 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.12■□□□□ 0.81
HMGCLP35914 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGCLP35914 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HMGCLP35914 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
HMGCLP35914 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HMGCLP35914 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
HMGCLP35914 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms