Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 HOP2YGL033W 657 nt2.59□□□□□ -1.99
MSH2P25847 RPL42BYHR141C 321 nt2.59□□□□□ -1.99
MSH2P25847 HTB2YBL002W 396 nt2.59□□□□□ -1.99
MSH2P25847 KTI11YBL071W-A 249 nt2.59□□□□□ -1.99
MSH2P25847 RPL42AYNL162W 321 nt2.59□□□□□ -1.99
MSH2P25847 SAR1YPL218W 573 nt2.59□□□□□ -1.99
MSH2P25847 CLN3YAL040C 1743 nt2.59□□□□□ -2
MSH2P25847 VPS34YLR240W 2628 nt2.58□□□□□ -2
MSH2P25847 GRR1YJR090C 3456 nt2.58□□□□□ -2
MSH2P25847 YLR146W-AYLR146W-A 189 nt2.58□□□□□ -2
MSH2P25847 SIR4YDR227W 4077 nt2.58□□□□□ -2
MSH2P25847 EFR3YMR212C 2349 nt2.58□□□□□ -2
MSH2P25847 TIM9YEL020W-A 264 nt2.57□□□□□ -2
MSH2P25847 YKL183C-AYKL183C-A 213 nt2.57□□□□□ -2
MSH2P25847 RIM20YOR275C 1986 nt2.57□□□□□ -2
MSH2P25847 IRR1YIL026C 3453 nt2.57□□□□□ -2
MSH2P25847 VPS13YLL040C 9435 nt2.57□□□□□ -2
MSH2P25847 TRA1YHR099W 11235 nt2.56□□□□□ -2
MSH2P25847 YCR043CYCR043C 384 nt2.56□□□□□ -2
MSH2P25847 YNL114CYNL114C 372 nt2.56□□□□□ -2
MSH2P25847 YGL149WYGL149W 306 nt2.55□□□□□ -2
MSH2P25847 RAV1YJR033C 4074 nt2.55□□□□□ -2
MSH2P25847 RPL38YLR325C 237 nt2.55□□□□□ -2
MSH2P25847 ARP8YOR141C 2646 nt2.55□□□□□ -2
MSH2P25847 TRL1YJL087C 2484 nt2.54□□□□□ -2
MSH2P25847 MLH1YMR167W 2310 nt2.54□□□□□ -2
MSH2P25847 VPS8YAL002W 3825 nt2.54□□□□□ -2
MSH2P25847 YCL023CYCL023C 348 nt2.54□□□□□ -2
MSH2P25847 GIP3YPL137C 3831 nt2.54□□□□□ -2
MSH2P25847 YCR102W-AYCR102W-A 198 nt2.53□□□□□ -2
MSH2P25847 YMR290W-AYMR290W-A 348 nt2.53□□□□□ -2
MSH2P25847 YOR282WYOR282W 321 nt2.53□□□□□ -2
MSH2P25847 NUT2YPR168W 474 nt2.53□□□□□ -2
MSH2P25847 SWI6YLR182W 2412 nt2.53□□□□□ -2
MSH2P25847 HDA3YPR179C 1968 nt2.52□□□□□ -2.01
MSH2P25847 UBP15YMR304W 3693 nt2.52□□□□□ -2.01
MSH2P25847 NOP53YPL146C 1368 nt2.52□□□□□ -2.01
MSH2P25847 SPF1YEL031W 3648 nt2.52□□□□□ -2.01
MSH2P25847 PXA2YKL188C 2562 nt2.52□□□□□ -2.01
MSH2P25847 YDL062WYDL062W 426 nt2.52□□□□□ -2.01
MSH2P25847 YDR048CYDR048C 315 nt2.52□□□□□ -2.01
MSH2P25847 YLR255CYLR255C 354 nt2.52□□□□□ -2.01
MSH2P25847 CDC60YPL160W 3273 nt2.51□□□□□ -2.01
MSH2P25847 COS111YBR203W 2775 nt2.51□□□□□ -2.01
MSH2P25847 RPH1YER169W 2391 nt2.51□□□□□ -2.01
MSH2P25847 YOR055WYOR055W 435 nt2.51□□□□□ -2.01
MSH2P25847 YPR010C-AYPR010C-A 219 nt2.51□□□□□ -2.01
MSH2P25847 HTL1YCR020W-B 237 nt2.5□□□□□ -2.01
MSH2P25847 PCC1YKR095W-A 267 nt2.5□□□□□ -2.01
MSH2P25847 YLR053CYLR053C 327 nt2.5□□□□□ -2.01
MSH2P25847 UPS1YLR193C 528 nt2.5□□□□□ -2.01
MSH2P25847 YML007C-AYML007C-A 111 nt2.5□□□□□ -2.01
MSH2P25847 MF(ALPHA)1YPL187W 498 nt2.5□□□□□ -2.01
MSH2P25847 SWI5YDR146C 2130 nt2.5□□□□□ -2.01
MSH2P25847 RTT107YHR154W 3213 nt2.49□□□□□ -2.01
MSH2P25847 YEF3YLR249W 3135 nt2.49□□□□□ -2.01
MSH2P25847 CSF1YLR087C 8877 nt2.49□□□□□ -2.01
MSH2P25847 CYB5YNL111C 363 nt2.49□□□□□ -2.01
MSH2P25847 YOP1YPR028W 543 nt2.49□□□□□ -2.01
MSH2P25847 PHO91YNR013C 2685 nt2.49□□□□□ -2.01
MSH2P25847 YDR341CYDR341C 1824 nt2.49□□□□□ -2.01
MSH2P25847 IST2YBR086C 2841 nt2.49□□□□□ -2.01
MSH2P25847 TFC8YPL007C 1767 nt2.49□□□□□ -2.01
MSH2P25847 SCP160YJL080C 3669 nt2.48□□□□□ -2.01
MSH2P25847 CYC7YEL039C 342 nt2.48□□□□□ -2.01
MSH2P25847 IRA2YOL081W 9240 nt2.48□□□□□ -2.01
MSH2P25847 TOR1YJR066W 7413 nt2.47□□□□□ -2.01
MSH2P25847 SSQ1YLR369W 1974 nt2.47□□□□□ -2.01
MSH2P25847 VTC1YER072W 390 nt2.47□□□□□ -2.01
MSH2P25847 BRP1YGL007W 378 nt2.47□□□□□ -2.01
MSH2P25847 snR51snR51 107 nt2.47□□□□□ -2.01
MSH2P25847 RTT101YJL047C 2529 nt2.47□□□□□ -2.01
MSH2P25847 PDR11YIL013C 4236 nt2.46□□□□□ -2.02
MSH2P25847 NPC2YDL046W 522 nt2.46□□□□□ -2.02
MSH2P25847 EMP24YGL200C 612 nt2.46□□□□□ -2.02
MSH2P25847 YKR075W-AYKR075W-A 270 nt2.46□□□□□ -2.02
MSH2P25847 MUK1YPL070W 1839 nt2.46□□□□□ -2.02
MSH2P25847 SVL3YPL032C 2478 nt2.46□□□□□ -2.02
MSH2P25847 PET309YLR067C 2898 nt2.45□□□□□ -2.02
MSH2P25847 SYH1YPL105C 2550 nt2.45□□□□□ -2.02
MSH2P25847 YDR426CYDR426C 378 nt2.45□□□□□ -2.02
MSH2P25847 YIL156W-BYIL156W-B 222 nt2.45□□□□□ -2.02
MSH2P25847 NAM7YMR080C 2916 nt2.45□□□□□ -2.02
MSH2P25847 SLY1YDR189W 2001 nt2.45□□□□□ -2.02
MSH2P25847 NUP170YBL079W 4509 nt2.44□□□□□ -2.02
MSH2P25847 YIL102CYIL102C 306 nt2.44□□□□□ -2.02
MSH2P25847 PAU18YLL064C 363 nt2.44□□□□□ -2.02
MSH2P25847 PAU6YNR076W 363 nt2.44□□□□□ -2.02
MSH2P25847 APL5YPL195W 2799 nt2.44□□□□□ -2.02
MSH2P25847 MSB1YOR188W 3414 nt2.43□□□□□ -2.02
MSH2P25847 DBP6YNR038W 1890 nt2.43□□□□□ -2.02
MSH2P25847 PLC1YPL268W 2610 nt2.43□□□□□ -2.02
MSH2P25847 CFT2YLR115W 2580 nt2.43□□□□□ -2.02
MSH2P25847 RPL37BYDR500C 267 nt2.43□□□□□ -2.02
MSH2P25847 YPR002C-AYPR002C-A 198 nt2.43□□□□□ -2.02
MSH2P25847 RFX1YLR176C 2436 nt2.43□□□□□ -2.02
MSH2P25847 YHR073W-AYHR073W-A 177 nt2.42□□□□□ -2.02
MSH2P25847 YMR141W-AYMR141W-A 225 nt2.42□□□□□ -2.02
MSH2P25847 SCD5YOR329C 2619 nt2.41□□□□□ -2.02
MSH2P25847 ATG11YPR049C 3537 nt2.41□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms