Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS1P07996 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS1P07996 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS1P07996 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.62■□□□□ 0.57
THBS1P07996 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
THBS1P07996 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
THBS1P07996 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.62■□□□□ 0.57
THBS1P07996 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS1P07996 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS1P07996 AC112907.3-201ENST00000577781 2400 ntBASIC18.61■□□□□ 0.57
THBS1P07996 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
THBS1P07996 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.61■□□□□ 0.57
THBS1P07996 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
THBS1P07996 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THBS1P07996 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THBS1P07996 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THBS1P07996 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
THBS1P07996 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.61■□□□□ 0.57
THBS1P07996 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
THBS1P07996 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
THBS1P07996 RAP2CP1-201ENST00000605103 478 ntBASIC18.61■□□□□ 0.57
THBS1P07996 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THBS1P07996 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
THBS1P07996 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
THBS1P07996 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.61■□□□□ 0.57
THBS1P07996 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
THBS1P07996 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.6■□□□□ 0.57
THBS1P07996 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
THBS1P07996 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.6■□□□□ 0.57
THBS1P07996 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS1P07996 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
THBS1P07996 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.6■□□□□ 0.57
THBS1P07996 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
THBS1P07996 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
THBS1P07996 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS1P07996 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS1P07996 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.6■□□□□ 0.57
THBS1P07996 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
THBS1P07996 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.6■□□□□ 0.57
THBS1P07996 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
THBS1P07996 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS1P07996 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS1P07996 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.6■□□□□ 0.57
THBS1P07996 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
THBS1P07996 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.6■□□□□ 0.57
THBS1P07996 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS1P07996 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
THBS1P07996 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.59■□□□□ 0.57
THBS1P07996 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS1P07996 AC068338.2-201ENST00000563278 1430 ntBASIC18.59■□□□□ 0.57
THBS1P07996 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS1P07996 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
THBS1P07996 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.59■□□□□ 0.57
THBS1P07996 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
THBS1P07996 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.59■□□□□ 0.57
THBS1P07996 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS1P07996 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.59■□□□□ 0.57
THBS1P07996 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS1P07996 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
THBS1P07996 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS1P07996 MCRIP2P1-201ENST00000394346 511 ntBASIC18.59■□□□□ 0.57
THBS1P07996 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.59■□□□□ 0.57
THBS1P07996 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.59■□□□□ 0.57
THBS1P07996 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
THBS1P07996 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.59■□□□□ 0.57
THBS1P07996 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS1P07996 AC011767.1-201ENST00000617410 1153 ntBASIC18.59■□□□□ 0.57
THBS1P07996 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.59■□□□□ 0.57
THBS1P07996 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.59■□□□□ 0.57
THBS1P07996 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS1P07996 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS1P07996 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS1P07996 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
THBS1P07996 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THBS1P07996 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.59■□□□□ 0.57
THBS1P07996 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.59■□□□□ 0.57
THBS1P07996 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
THBS1P07996 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.58■□□□□ 0.57
THBS1P07996 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS1P07996 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THBS1P07996 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.58■□□□□ 0.56
THBS1P07996 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.58■□□□□ 0.56
THBS1P07996 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS1P07996 BID-214ENST00000617586 542 ntTSL 5 BASIC18.58■□□□□ 0.56
THBS1P07996 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THBS1P07996 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS1P07996 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS1P07996 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.58■□□□□ 0.56
THBS1P07996 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.58■□□□□ 0.56
THBS1P07996 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS1P07996 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS1P07996 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
THBS1P07996 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THBS1P07996 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS1P07996 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS1P07996 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
THBS1P07996 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS1P07996 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
THBS1P07996 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THBS1P07996 BX119927.1-201ENST00000636596 1552 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms