Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DPB1P04440 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DPB1P04440 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DPB1P04440 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 CCDC92B-201ENST00000575506 885 ntBASIC18.11■□□□□ 0.49
HLA-DPB1P04440 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DPB1P04440 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 AC079140.4-201ENST00000507448 529 ntBASIC18.1■□□□□ 0.49
HLA-DPB1P04440 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPB1P04440 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 AIRN-201ENST00000601203 4374 ntBASIC18.09■□□□□ 0.49
HLA-DPB1P04440 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPB1P04440 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
HLA-DPB1P04440 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.08■□□□□ 0.49
HLA-DPB1P04440 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
HLA-DPB1P04440 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DPB1P04440 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DPB1P04440 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.08■□□□□ 0.49
HLA-DPB1P04440 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DPB1P04440 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 KRT18P14-201ENST00000534205 1250 ntBASIC18.08■□□□□ 0.48
HLA-DPB1P04440 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 TERF1P2-201ENST00000583350 1212 ntBASIC18.08■□□□□ 0.48
HLA-DPB1P04440 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms