Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.22■□□□□ 0.03
LTAP01374 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LTAP01374 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.22■□□□□ 0.03
LTAP01374 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.22■□□□□ 0.03
LTAP01374 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.22■□□□□ 0.03
LTAP01374 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LTAP01374 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LTAP01374 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.21■□□□□ 0.03
LTAP01374 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.21■□□□□ 0.03
LTAP01374 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LTAP01374 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.21■□□□□ 0.03
LTAP01374 BX119927.1-201ENST00000636596 1552 ntBASIC15.21■□□□□ 0.03
LTAP01374 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LTAP01374 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.21■□□□□ 0.03
LTAP01374 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.21■□□□□ 0.03
LTAP01374 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.21■□□□□ 0.03
LTAP01374 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 MIR4767-201ENST00000582827 78 ntBASIC15.21■□□□□ 0.03
LTAP01374 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LTAP01374 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LTAP01374 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
LTAP01374 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LTAP01374 AC116050.2-201ENST00000612102 1779 ntBASIC15.21■□□□□ 0.02
LTAP01374 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LTAP01374 Z82202.1-201ENST00000623446 1880 ntBASIC15.2■□□□□ 0.02
LTAP01374 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
LTAP01374 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 DPP3P2-201ENST00000416030 1696 ntBASIC15.2■□□□□ 0.02
LTAP01374 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LTAP01374 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.2■□□□□ 0.02
LTAP01374 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.2■□□□□ 0.02
LTAP01374 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.2■□□□□ 0.02
LTAP01374 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LTAP01374 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.2■□□□□ 0.02
LTAP01374 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LTAP01374 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LTAP01374 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.19■□□□□ 0.02
LTAP01374 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LTAP01374 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.19■□□□□ 0.02
LTAP01374 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.19■□□□□ 0.02
LTAP01374 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LTAP01374 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.19■□□□□ 0.02
LTAP01374 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.19■□□□□ 0.02
LTAP01374 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.19■□□□□ 0.02
LTAP01374 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.19■□□□□ 0.02
LTAP01374 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LTAP01374 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LTAP01374 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LTAP01374 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LTAP01374 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LTAP01374 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LTAP01374 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LTAP01374 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LTAP01374 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.19■□□□□ 0.02
LTAP01374 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LTAP01374 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LTAP01374 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LTAP01374 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.19■□□□□ 0.02
LTAP01374 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.18■□□□□ 0.02
LTAP01374 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.18■□□□□ 0.02
LTAP01374 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LTAP01374 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LTAP01374 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.18■□□□□ 0.02
LTAP01374 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LTAP01374 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LTAP01374 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LTAP01374 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LTAP01374 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LTAP01374 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.18■□□□□ 0.02
LTAP01374 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LTAP01374 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LTAP01374 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms