Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.94■□□□□ 0.46
CNOT4O95628 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.94■□□□□ 0.46
CNOT4O95628 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT4O95628 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT4O95628 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CNOT4O95628 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.93■□□□□ 0.46
CNOT4O95628 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CNOT4O95628 PRORSD1P-201ENST00000295112 541 ntBASIC17.93■□□□□ 0.46
CNOT4O95628 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT4O95628 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CNOT4O95628 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT4O95628 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT4O95628 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT4O95628 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.93■□□□□ 0.46
CNOT4O95628 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
CNOT4O95628 C2orf69P4-201ENST00000565394 541 ntBASIC17.93■□□□□ 0.46
CNOT4O95628 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.93■□□□□ 0.46
CNOT4O95628 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.93■□□□□ 0.46
CNOT4O95628 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.93■□□□□ 0.46
CNOT4O95628 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CNOT4O95628 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT4O95628 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.93■□□□□ 0.46
CNOT4O95628 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT4O95628 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.93■□□□□ 0.46
CNOT4O95628 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT4O95628 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT4O95628 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT4O95628 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT4O95628 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT4O95628 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT4O95628 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT4O95628 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CNOT4O95628 KRT8P36-201ENST00000489121 1440 ntBASIC17.92■□□□□ 0.46
CNOT4O95628 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT4O95628 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CNOT4O95628 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT4O95628 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT4O95628 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.92■□□□□ 0.46
CNOT4O95628 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CNOT4O95628 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.92■□□□□ 0.46
CNOT4O95628 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.92■□□□□ 0.46
CNOT4O95628 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT4O95628 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT4O95628 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT4O95628 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT4O95628 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CNOT4O95628 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.92■□□□□ 0.46
CNOT4O95628 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT4O95628 AIRN-201ENST00000601203 4374 ntBASIC17.91■□□□□ 0.46
CNOT4O95628 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CNOT4O95628 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.91■□□□□ 0.46
CNOT4O95628 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT4O95628 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.91■□□□□ 0.46
CNOT4O95628 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CNOT4O95628 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT4O95628 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT4O95628 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CNOT4O95628 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.91■□□□□ 0.46
CNOT4O95628 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.91■□□□□ 0.46
CNOT4O95628 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.91■□□□□ 0.46
CNOT4O95628 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.91■□□□□ 0.46
CNOT4O95628 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.91■□□□□ 0.46
CNOT4O95628 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.91■□□□□ 0.46
CNOT4O95628 AC060766.5-201ENST00000590539 871 ntBASIC17.91■□□□□ 0.46
CNOT4O95628 AP006294.2-201ENST00000641667 209 ntBASIC17.91■□□□□ 0.46
CNOT4O95628 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT4O95628 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.91■□□□□ 0.46
CNOT4O95628 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT4O95628 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.91■□□□□ 0.46
CNOT4O95628 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
CNOT4O95628 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.91■□□□□ 0.46
CNOT4O95628 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNOT4O95628 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.9■□□□□ 0.46
CNOT4O95628 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.9■□□□□ 0.46
CNOT4O95628 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CNOT4O95628 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CNOT4O95628 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.9■□□□□ 0.46
CNOT4O95628 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.9■□□□□ 0.46
CNOT4O95628 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.9■□□□□ 0.46
CNOT4O95628 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.9■□□□□ 0.46
CNOT4O95628 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CNOT4O95628 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNOT4O95628 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms