Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC43A1O75387 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC43A1O75387 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
SLC43A1O75387 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 AC007322.1-201ENST00000426983 750 ntBASIC18.28■□□□□ 0.52
SLC43A1O75387 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC43A1O75387 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC43A1O75387 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC43A1O75387 AC080038.1-201ENST00000611274 1154 ntBASIC18.28■□□□□ 0.52
SLC43A1O75387 AC092666.2-201ENST00000613287 246 ntBASIC18.28■□□□□ 0.52
SLC43A1O75387 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC43A1O75387 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC43A1O75387 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 AC006128.1-201ENST00000624704 1661 ntBASIC18.28■□□□□ 0.52
SLC43A1O75387 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC43A1O75387 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC43A1O75387 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC43A1O75387 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC43A1O75387 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC43A1O75387 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC43A1O75387 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC43A1O75387 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC43A1O75387 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SLC43A1O75387 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC43A1O75387 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC43A1O75387 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC43A1O75387 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.27■□□□□ 0.52
SLC43A1O75387 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC43A1O75387 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
SLC43A1O75387 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC43A1O75387 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC43A1O75387 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC43A1O75387 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SLC43A1O75387 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC43A1O75387 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC43A1O75387 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.27■□□□□ 0.51
SLC43A1O75387 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
SLC43A1O75387 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SLC43A1O75387 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SLC43A1O75387 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SLC43A1O75387 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.27■□□□□ 0.51
SLC43A1O75387 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SLC43A1O75387 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
SLC43A1O75387 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SLC43A1O75387 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SLC43A1O75387 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SLC43A1O75387 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC43A1O75387 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC43A1O75387 AL162412.1-201ENST00000567129 965 ntBASIC18.26■□□□□ 0.51
SLC43A1O75387 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SLC43A1O75387 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC43A1O75387 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC43A1O75387 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLC43A1O75387 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC43A1O75387 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC43A1O75387 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC43A1O75387 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
SLC43A1O75387 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC43A1O75387 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
SLC43A1O75387 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC43A1O75387 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
SLC43A1O75387 BX323043.1-201ENST00000641006 1765 ntBASIC18.25■□□□□ 0.51
SLC43A1O75387 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SLC43A1O75387 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC43A1O75387 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC43A1O75387 PLK5-205ENST00000642079 1969 ntBASIC18.25■□□□□ 0.51
SLC43A1O75387 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SLC43A1O75387 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC43A1O75387 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SLC43A1O75387 CNN2P6-201ENST00000439038 900 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms