Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ZNF253O75346 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ZNF253O75346 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF253O75346 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.69■□□□□ 0.1
ZNF253O75346 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF253O75346 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ZNF253O75346 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF253O75346 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF253O75346 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF253O75346 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ZNF253O75346 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF253O75346 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
ZNF253O75346 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF253O75346 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF253O75346 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
ZNF253O75346 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.68■□□□□ 0.1
ZNF253O75346 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ZNF253O75346 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ZNF253O75346 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF253O75346 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
ZNF253O75346 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
ZNF253O75346 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ZNF253O75346 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF253O75346 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ZNF253O75346 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF253O75346 POU5F1P4-201ENST00000413175 1085 ntBASIC15.67■□□□□ 0.1
ZNF253O75346 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF253O75346 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF253O75346 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF253O75346 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ZNF253O75346 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ZNF253O75346 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF253O75346 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ZNF253O75346 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF253O75346 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
ZNF253O75346 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 RASA4CP-201ENST00000424092 1398 ntBASIC15.66■□□□□ 0.1
ZNF253O75346 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ZNF253O75346 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZNF253O75346 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF253O75346 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF253O75346 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
ZNF253O75346 AC012414.1-201ENST00000556676 535 ntBASIC15.66■□□□□ 0.1
ZNF253O75346 AC008175.2-201ENST00000612840 297 ntBASIC15.66■□□□□ 0.1
ZNF253O75346 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.66■□□□□ 0.1
ZNF253O75346 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF253O75346 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ZNF253O75346 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 AL162377.1-201ENST00000618844 1793 ntBASIC15.66■□□□□ 0.1
ZNF253O75346 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZNF253O75346 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ZNF253O75346 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.66■□□□□ 0.1
ZNF253O75346 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF253O75346 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF253O75346 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF253O75346 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms