Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDH7O60245 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH7O60245 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH7O60245 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH7O60245 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH7O60245 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH7O60245 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH7O60245 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PCDH7O60245 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH7O60245 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH7O60245 CNN2P6-201ENST00000439038 900 ntBASIC19.31■□□□□ 0.68
PCDH7O60245 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH7O60245 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH7O60245 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.31■□□□□ 0.68
PCDH7O60245 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDH7O60245 BID-214ENST00000617586 542 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH7O60245 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDH7O60245 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDH7O60245 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH7O60245 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH7O60245 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH7O60245 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH7O60245 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH7O60245 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH7O60245 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PCDH7O60245 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
PCDH7O60245 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH7O60245 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH7O60245 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH7O60245 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH7O60245 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH7O60245 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH7O60245 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH7O60245 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH7O60245 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH7O60245 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDH7O60245 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.3■□□□□ 0.68
PCDH7O60245 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.3■□□□□ 0.68
PCDH7O60245 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDH7O60245 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDH7O60245 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCDH7O60245 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH7O60245 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
PCDH7O60245 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH7O60245 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH7O60245 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH7O60245 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDH7O60245 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH7O60245 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH7O60245 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH7O60245 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH7O60245 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH7O60245 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDH7O60245 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH7O60245 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH7O60245 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH7O60245 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH7O60245 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH7O60245 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH7O60245 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH7O60245 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH7O60245 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH7O60245 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDH7O60245 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH7O60245 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDH7O60245 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH7O60245 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.29■□□□□ 0.68
PCDH7O60245 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH7O60245 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDH7O60245 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH7O60245 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH7O60245 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH7O60245 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH7O60245 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
PCDH7O60245 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDH7O60245 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH7O60245 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDH7O60245 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH7O60245 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH7O60245 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH7O60245 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH7O60245 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH7O60245 AC068338.2-201ENST00000563278 1430 ntBASIC19.28■□□□□ 0.68
PCDH7O60245 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH7O60245 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDH7O60245 RARRES2P4-201ENST00000514074 484 ntBASIC19.28■□□□□ 0.68
PCDH7O60245 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDH7O60245 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH7O60245 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH7O60245 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH7O60245 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH7O60245 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
PCDH7O60245 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH7O60245 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH7O60245 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH7O60245 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH7O60245 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH7O60245 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH7O60245 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH7O60245 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms