Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSSCA1O60232 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSSCA1O60232 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSSCA1O60232 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.46■□□□□ 0.23
SSSCA1O60232 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSSCA1O60232 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSSCA1O60232 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.46■□□□□ 0.23
SSSCA1O60232 AC005224.4-201ENST00000583262 1652 ntBASIC16.46■□□□□ 0.23
SSSCA1O60232 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.46■□□□□ 0.23
SSSCA1O60232 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.45■□□□□ 0.22
SSSCA1O60232 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SSSCA1O60232 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SSSCA1O60232 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.45■□□□□ 0.22
SSSCA1O60232 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.45■□□□□ 0.22
SSSCA1O60232 AC061975.6-201ENST00000579045 1553 ntBASIC16.45■□□□□ 0.22
SSSCA1O60232 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.45■□□□□ 0.22
SSSCA1O60232 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.45■□□□□ 0.22
SSSCA1O60232 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.45■□□□□ 0.22
SSSCA1O60232 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.45■□□□□ 0.22
SSSCA1O60232 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSSCA1O60232 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.44■□□□□ 0.22
SSSCA1O60232 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.44■□□□□ 0.22
SSSCA1O60232 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.44■□□□□ 0.22
SSSCA1O60232 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.44■□□□□ 0.22
SSSCA1O60232 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SSSCA1O60232 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SSSCA1O60232 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
SSSCA1O60232 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SSSCA1O60232 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.44■□□□□ 0.22
SSSCA1O60232 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSSCA1O60232 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.43■□□□□ 0.22
SSSCA1O60232 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.43■□□□□ 0.22
SSSCA1O60232 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SSSCA1O60232 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SSSCA1O60232 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SSSCA1O60232 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.43■□□□□ 0.22
SSSCA1O60232 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.43■□□□□ 0.22
SSSCA1O60232 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.43■□□□□ 0.22
SSSCA1O60232 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SSSCA1O60232 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
SSSCA1O60232 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SSSCA1O60232 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SSSCA1O60232 AC090340.1-201ENST00000620778 4980 ntBASIC16.43■□□□□ 0.22
SSSCA1O60232 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 AC005332.7-201ENST00000614046 2005 ntBASIC16.43■□□□□ 0.22
SSSCA1O60232 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
SSSCA1O60232 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.43■□□□□ 0.22
SSSCA1O60232 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSSCA1O60232 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SSSCA1O60232 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SSSCA1O60232 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSSCA1O60232 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SSSCA1O60232 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSSCA1O60232 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSSCA1O60232 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.42■□□□□ 0.22
SSSCA1O60232 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SSSCA1O60232 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.42■□□□□ 0.22
SSSCA1O60232 AC133561.4-201ENST00000566112 224 ntBASIC16.42■□□□□ 0.22
SSSCA1O60232 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSSCA1O60232 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms