Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
COPEO14579 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPEO14579 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
COPEO14579 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPEO14579 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
COPEO14579 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COPEO14579 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPEO14579 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPEO14579 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COPEO14579 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COPEO14579 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.18■□□□□ 0.82
COPEO14579 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
COPEO14579 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.18■□□□□ 0.82
COPEO14579 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.18■□□□□ 0.82
COPEO14579 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COPEO14579 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COPEO14579 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPEO14579 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPEO14579 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPEO14579 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
COPEO14579 BX323043.1-201ENST00000641006 1765 ntBASIC20.18■□□□□ 0.82
COPEO14579 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.18■□□□□ 0.82
COPEO14579 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
COPEO14579 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPEO14579 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.18■□□□□ 0.82
COPEO14579 AL020996.1-203ENST00000536896 2307 ntBASIC20.18■□□□□ 0.82
COPEO14579 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPEO14579 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
COPEO14579 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COPEO14579 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPEO14579 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
COPEO14579 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
COPEO14579 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.17■□□□□ 0.82
COPEO14579 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPEO14579 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
COPEO14579 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.17■□□□□ 0.82
COPEO14579 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.17■□□□□ 0.82
COPEO14579 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.17■□□□□ 0.82
COPEO14579 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.17■□□□□ 0.82
COPEO14579 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPEO14579 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.17■□□□□ 0.82
COPEO14579 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.17■□□□□ 0.82
COPEO14579 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.17■□□□□ 0.82
COPEO14579 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPEO14579 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.17■□□□□ 0.82
COPEO14579 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.17■□□□□ 0.82
COPEO14579 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPEO14579 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPEO14579 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPEO14579 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPEO14579 DPP3P2-201ENST00000416030 1696 ntBASIC20.16■□□□□ 0.82
COPEO14579 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPEO14579 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.16■□□□□ 0.82
COPEO14579 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPEO14579 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
COPEO14579 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPEO14579 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.16■□□□□ 0.82
COPEO14579 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.16■□□□□ 0.82
COPEO14579 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPEO14579 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.16■□□□□ 0.82
COPEO14579 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COPEO14579 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.16■□□□□ 0.82
COPEO14579 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.16■□□□□ 0.82
COPEO14579 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.16■□□□□ 0.82
COPEO14579 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPEO14579 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.16■□□□□ 0.82
COPEO14579 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.16■□□□□ 0.82
COPEO14579 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COPEO14579 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPEO14579 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
COPEO14579 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.15■□□□□ 0.82
COPEO14579 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COPEO14579 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COPEO14579 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COPEO14579 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COPEO14579 AC131212.1-201ENST00000613771 668 ntBASIC20.15■□□□□ 0.82
COPEO14579 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COPEO14579 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COPEO14579 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
COPEO14579 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COPEO14579 TMEM179-206ENST00000616017 1645 ntBASIC20.15■□□□□ 0.82
COPEO14579 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COPEO14579 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COPEO14579 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COPEO14579 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
COPEO14579 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
COPEO14579 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
COPEO14579 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COPEO14579 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.14■□□□□ 0.82
COPEO14579 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COPEO14579 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPEO14579 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPEO14579 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.14■□□□□ 0.81
COPEO14579 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPEO14579 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COPEO14579 AC098818.2-201ENST00000564925 2320 ntBASIC20.14■□□□□ 0.81
COPEO14579 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPEO14579 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPEO14579 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COPEO14579 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms