Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.72■■□□□ 1.07
SOX1O00570 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX1O00570 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SOX1O00570 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.72■■□□□ 1.07
SOX1O00570 HMGA1P5-201ENST00000412453 271 ntBASIC21.72■■□□□ 1.07
SOX1O00570 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX1O00570 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SOX1O00570 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.72■■□□□ 1.07
SOX1O00570 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SOX1O00570 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.72■■□□□ 1.07
SOX1O00570 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SOX1O00570 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.72■■□□□ 1.07
SOX1O00570 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.72■■□□□ 1.07
SOX1O00570 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX1O00570 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX1O00570 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX1O00570 AC092053.2-201ENST00000640557 1818 ntBASIC21.71■■□□□ 1.07
SOX1O00570 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOX1O00570 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX1O00570 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.71■■□□□ 1.07
SOX1O00570 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX1O00570 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX1O00570 COX11P1-201ENST00000489116 835 ntBASIC21.71■■□□□ 1.07
SOX1O00570 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.71■■□□□ 1.07
SOX1O00570 AC011558.1-201ENST00000623459 338 ntBASIC21.71■■□□□ 1.07
SOX1O00570 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX1O00570 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX1O00570 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOX1O00570 KRT8P10-201ENST00000450021 1447 ntBASIC21.71■■□□□ 1.07
SOX1O00570 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
SOX1O00570 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX1O00570 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX1O00570 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.7■■□□□ 1.06
SOX1O00570 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SOX1O00570 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.7■■□□□ 1.06
SOX1O00570 AL845331.1-201ENST00000424978 1190 ntBASIC21.7■■□□□ 1.06
SOX1O00570 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.7■■□□□ 1.06
SOX1O00570 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.7■■□□□ 1.06
SOX1O00570 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.7■■□□□ 1.06
SOX1O00570 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.7■■□□□ 1.06
SOX1O00570 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.7■■□□□ 1.06
SOX1O00570 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX1O00570 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX1O00570 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
SOX1O00570 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SOX1O00570 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX1O00570 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.69■■□□□ 1.06
SOX1O00570 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.69■■□□□ 1.06
SOX1O00570 AL671277.2-201ENST00000458060 996 ntBASIC21.69■■□□□ 1.06
SOX1O00570 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.69■■□□□ 1.06
SOX1O00570 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.69■■□□□ 1.06
SOX1O00570 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.69■■□□□ 1.06
SOX1O00570 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOX1O00570 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.69■■□□□ 1.06
SOX1O00570 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.69■■□□□ 1.06
SOX1O00570 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX1O00570 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOX1O00570 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOX1O00570 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.68■■□□□ 1.06
SOX1O00570 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX1O00570 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.68■■□□□ 1.06
SOX1O00570 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.68■■□□□ 1.06
SOX1O00570 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SOX1O00570 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.68■■□□□ 1.06
SOX1O00570 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX1O00570 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.68■■□□□ 1.06
SOX1O00570 KRT8P45-201ENST00000414328 1447 ntBASIC21.68■■□□□ 1.06
SOX1O00570 FSCN1P1-201ENST00000568912 1481 ntBASIC21.68■■□□□ 1.06
SOX1O00570 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SOX1O00570 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SOX1O00570 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SOX1O00570 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX1O00570 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX1O00570 LINC01124-201ENST00000409786 2117 ntBASIC21.67■■□□□ 1.06
SOX1O00570 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX1O00570 ANOS2P-203ENST00000472227 1816 ntBASIC21.67■■□□□ 1.06
SOX1O00570 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX1O00570 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX1O00570 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SOX1O00570 PGM5P4-201ENST00000421970 445 ntBASIC21.67■■□□□ 1.06
SOX1O00570 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.67■■□□□ 1.06
SOX1O00570 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
SOX1O00570 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SOX1O00570 AL356652.1-201ENST00000615962 565 ntBASIC21.67■■□□□ 1.06
SOX1O00570 AC130371.2-201ENST00000619443 611 ntBASIC21.67■■□□□ 1.06
SOX1O00570 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SOX1O00570 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.66■■□□□ 1.06
SOX1O00570 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SOX1O00570 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX1O00570 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX1O00570 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SOX1O00570 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX1O00570 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SOX1O00570 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SOX1O00570 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX1O00570 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX1O00570 AL022342.1-201ENST00000400363 863 ntBASIC21.66■■□□□ 1.06
SOX1O00570 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.66■■□□□ 1.06
SOX1O00570 KRT17P6-201ENST00000453795 1220 ntBASIC21.66■■□□□ 1.06
SOX1O00570 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms