Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDUFA4O00483 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.52■□□□□ 0.08
NDUFA4O00483 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NDUFA4O00483 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.52■□□□□ 0.07
NDUFA4O00483 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
NDUFA4O00483 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDUFA4O00483 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.52■□□□□ 0.07
NDUFA4O00483 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
NDUFA4O00483 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
NDUFA4O00483 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
NDUFA4O00483 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDUFA4O00483 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NDUFA4O00483 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NDUFA4O00483 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.52■□□□□ 0.07
NDUFA4O00483 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.52■□□□□ 0.07
NDUFA4O00483 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
NDUFA4O00483 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDUFA4O00483 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.51■□□□□ 0.07
NDUFA4O00483 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NDUFA4O00483 AL512408.1-201ENST00000569378 2000 ntBASIC15.51■□□□□ 0.07
NDUFA4O00483 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.51■□□□□ 0.07
NDUFA4O00483 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
NDUFA4O00483 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.51■□□□□ 0.07
NDUFA4O00483 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NDUFA4O00483 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.51■□□□□ 0.07
NDUFA4O00483 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.51■□□□□ 0.07
NDUFA4O00483 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 AC093787.1-201ENST00000450396 207 ntBASIC15.51■□□□□ 0.07
NDUFA4O00483 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.51■□□□□ 0.07
NDUFA4O00483 AC105036.2-201ENST00000569468 176 ntBASIC15.51■□□□□ 0.07
NDUFA4O00483 AC092666.2-201ENST00000613287 246 ntBASIC15.51■□□□□ 0.07
NDUFA4O00483 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 MKRN4P-201ENST00000444706 1521 ntBASIC15.51■□□□□ 0.07
NDUFA4O00483 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NDUFA4O00483 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NDUFA4O00483 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.51■□□□□ 0.07
NDUFA4O00483 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.51■□□□□ 0.07
NDUFA4O00483 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
NDUFA4O00483 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA4O00483 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFA4O00483 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NDUFA4O00483 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
NDUFA4O00483 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NDUFA4O00483 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFA4O00483 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFA4O00483 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFA4O00483 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 AL355472.2-201ENST00000422958 438 ntBASIC15.5■□□□□ 0.07
NDUFA4O00483 CROCCP5-201ENST00000436658 830 ntBASIC15.5■□□□□ 0.07
NDUFA4O00483 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
NDUFA4O00483 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFA4O00483 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFA4O00483 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFA4O00483 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFA4O00483 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFA4O00483 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFA4O00483 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NDUFA4O00483 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA4O00483 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
NDUFA4O00483 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NDUFA4O00483 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFA4O00483 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFA4O00483 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA4O00483 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms